Information for 1-NNGGGRAWTYCCC (Motif 1)

G C T A C T G A C A T G A C T G C A T G T C A G G T C A C G A T A C G T G A T C G T A C A G T C G A T C
Reverse Opposite:
C T A G C T A G C A T G C T A G T G C A G C T A C A G T A G T C G T A C A G T C G T A C G A C T C G A T
p-value:1e-303
log p-value:-6.982e+02
Information Content per bp:1.582
Number of Target Sequences with motif352.0
Percentage of Target Sequences with motif44.11%
Number of Background Sequences with motif1444.7
Percentage of Background Sequences with motif3.05%
Average Position of motif in Targets51.0 +/- 16.9bp
Average Position of motif in Background48.4 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFKB2/MA0778.1/Jaspar

Match Rank:1
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:NNGGGRAWTYCCC-
-AGGGGAATCCCCT
 G C T A C T G A C A T G A C T G C A T G T C A G G T C A C G A T A C G T G A T C G T A C A G T C G A T C A C G T
A C G T T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.93
Offset:1
Orientation:forward strand
Alignment:NNGGGRAWTYCCC
-NGGGGATTTCCC
 G C T A C T G A C A T G A C T G C A T G T C A G G T C A C G A T A C G T G A T C G T A C A G T C G A T C
A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:3
Score:0.91
Offset:1
Orientation:forward strand
Alignment:NNGGGRAWTYCCC
-GGGGGAATCCCC
 G C T A C T G A C A T G A C T G C A T G T C A G G T C A C G A T A C G T G A T C G T A C A G T C G A T C
A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

NFKB1/MA0105.4/Jaspar

Match Rank:4
Score:0.89
Offset:1
Orientation:forward strand
Alignment:NNGGGRAWTYCCC-
-AGGGGAATCCCCT
 G C T A C T G A C A T G A C T G C A T G T C A G G T C A C G A T A C G T G A T C G T A C A G T C G A T C A C G T
A C G T T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.89
Offset:3
Orientation:reverse strand
Alignment:NNGGGRAWTYCCC
---GGAAATCCCC
 G C T A C T G A C A T G A C T G C A T G T C A G G T C A C G A T A C G T G A T C G T A C A G T C G A T C
A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.85
Offset:3
Orientation:reverse strand
Alignment:NNGGGRAWTYCCC
---GGAAATTCCC
 G C T A C T G A C A T G A C T G C A T G T C A G G T C A C G A T A C G T G A T C G T A C A G T C G A T C
A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.83
Offset:2
Orientation:reverse strand
Alignment:NNGGGRAWTYCCC
--GGGAATTTCC-
 G C T A C T G A C A T G A C T G C A T G T C A G G T C A C G A T A C G T G A T C G T A C A G T C G A T C
A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

REL/MA0101.1/Jaspar

Match Rank:8
Score:0.83
Offset:3
Orientation:reverse strand
Alignment:NNGGGRAWTYCCC
---GGAAANCCCC
 G C T A C T G A C A T G A C T G C A T G T C A G G T C A C G A T A C G T G A T C G T A C A G T C G A T C
A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:NNGGGRAWTYCCC
-TGGGGA------
 G C T A C T G A C A T G A C T G C A T G T C A G G T C A C G A T A C G T G A T C G T A C A G T C G A T C
A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0201.1_Zfp281_2/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----NNGGGRAWTYCCC
NNNATTGGGGGTNTCCT
 A C G T A C G T A C G T A C G T G C T A C T G A C A T G A C T G C A T G T C A G G T C A C G A T A C G T G A T C G T A C A G T C G A T C
A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T