Information for 3-GCTAGGWAAAGCA (Motif 7)

A C T G G A T C A G C T C G T A A C T G A C T G C G A T C G T A G T C A C T G A A C T G A G T C C G T A
Reverse Opposite:
C G A T A C T G A G T C A G C T A C G T A C G T G C T A G T A C G T A C A C G T C T G A C A T G G T A C
p-value:1e-13
log p-value:-3.029e+01
Information Content per bp:1.773
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif10.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.9 +/- 17.0bp
Average Position of motif in Background69.0 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2B/MA0660.1/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCTAGGWAAAGCA
GCTATAAATAGC-
 A C T G G A T C A G C T C G T A A C T G A C T G C G A T C G T A G T C A C T G A A C T G A G T C C G T A
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCTAGGWAAAGCA
GAAAGTGAAAGT-
 A C T G G A T C A G C T C G T A A C T G A C T G C G A T C G T A G T C A C T G A A C T G A G T C C G T A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCTAGGWAAAGCA
GCTAAAAATAGC-
 A C T G G A T C A G C T C G T A A C T G A C T G C G A T C G T A G T C A C T G A A C T G A G T C C G T A
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GCTAGGWAAAGCA
---TGGAACAGMA
 A C T G G A T C A G C T C G T A A C T G A C T G C G A T C G T A G T C A C T G A A C T G A G T C C G T A
A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

POU5F1B/MA0792.1/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCTAGGWAAAGCA
--TATGCAAAT--
 A C T G G A T C A G C T C G T A A C T G A C T G C G A T C G T A G T C A C T G A A C T G A G T C C G T A
A C G T A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GCTAGGWAAAGCA-
--TATGCWAATBAV
 A C T G G A T C A G C T C G T A A C T G A C T G C G A T C G T A G T C A C T G A A C T G A G T C C G T A A C G T
A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

MEF2D/MA0773.1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GCTAGGWAAAGCA
ACTATAAATAGA-
 A C T G G A T C A G C T C G T A A C T G A C T G C G A T C G T A G T C A C T G A A C T G A G T C C G T A
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A A C G T

IRF2/MA0051.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCTAGGWAAAGCA----
GGAAAGCGAAACCAAAAC
 A C G T A C T G G A T C A G C T C G T A A C T G A C T G C G A T C G T A G T C A C T G A A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

MEF2A/MA0052.3/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GCTAGGWAAAGCA
TCTAAAAATAGA-
 A C T G G A T C A G C T C G T A A C T G A C T G C G A T C G T A G T C A C T G A A C T G A G T C C G T A
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GCTAGGWAAAGCA-
AGAAAGTGAAAGTGA
 A C G T A C T G G A T C A G C T C G T A A C T G A C T G C G A T C G T A G T C A C T G A A C T G A G T C C G T A A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A