Information for 5-AAGAGTYCTGCMAAGC (Motif 6)

G T C A C G T A C T A G C T G A A C T G C A G T A G T C A T G C A C G T A T C G A T G C T G A C G T C A C T G A C T A G A G T C
Reverse Opposite:
T A C G A G T C A G C T A C G T A C T G A T C G A T G C G T C A A T C G C T A G G T C A A G T C A G C T A G T C C G A T A C G T
p-value:1e-13
log p-value:-3.048e+01
Information Content per bp:1.725
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets31.6 +/- 9.1bp
Average Position of motif in Background70.0 +/- 7.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AAGAGTYCTGCMAAGC
---AGGCCTNG-----
 G T C A C G T A C T A G C T G A A C T G C A G T A G T C A T G C A C G T A T C G A T G C T G A C G T C A C T G A C T A G A G T C
A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

NFE2/MA0841.1/Jaspar

Match Rank:2
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AAGAGTYCTGCMAAGC
GATGAGTCATN------
 A C G T G T C A C G T A C T A G C T G A A C T G C A G T A G T C A T G C A C G T A T C G A T G C T G A C G T C A C T G A C T A G A G T C
T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.51
Offset:7
Orientation:forward strand
Alignment:AAGAGTYCTGCMAAGC
-------TTGCCAAG-
 G T C A C G T A C T A G C T G A A C T G C A G T A G T C A T G C A C G T A T C G A T G C T G A C G T C A C T G A C T A G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T

PROX1/MA0794.1/Jaspar

Match Rank:4
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-AAGAGTYCTGCMAAGC
CAAGACGCCTTA-----
 A C G T G T C A C G T A C T A G C T G A A C T G C A G T A G T C A T G C A C G T A T C G A T G C T G A C G T C A C T G A C T A G A G T C
A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.50
Offset:3
Orientation:forward strand
Alignment:AAGAGTYCTGCMAAGC
---AGGCCTAG-----
 G T C A C G T A C T A G C T G A A C T G C A G T A G T C A T G C A C G T A T C G A T G C T G A C G T C A C T G A C T A G A G T C
A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T

JDP2/MA0655.1/Jaspar

Match Rank:6
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:AAGAGTYCTGCMAAGC
ATGAGTCAT-------
 G T C A C G T A C T A G C T G A A C T G C A G T A G T C A T G C A C G T A T C G A T G C T G A C G T C A C T G A C T A G A G T C
C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:7
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---AAGAGTYCTGCMAAGC
NNNNTGAGCACTGTNNG--
 A C G T A C G T A C G T G T C A C G T A C T A G C T G A A C T G C A G T A G T C A T G C A C G T A T C G A T G C T G A C G T C A C T G A C T A G A G T C
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:8
Score:0.47
Offset:-5
Orientation:reverse strand
Alignment:-----AAGAGTYCTGCMAAGC
NTNNNAGGAGTCTCNTN----
 A C G T A C G T A C G T A C G T A C G T G T C A C G T A C T A G C T G A A C T G C A G T A G T C A T G C A C G T A T C G A T G C T G A C G T C A C T G A C T A G A G T C
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A A C G T A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:9
Score:0.47
Offset:-3
Orientation:forward strand
Alignment:---AAGAGTYCTGCMAAGC
GGCAAAAGTCCAATAA---
 A C G T A C G T A C G T G T C A C G T A C T A G C T G A A C T G C A G T A G T C A T G C A C G T A T C G A T G C T G A C G T C A C T G A C T A G A G T C
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.47
Offset:-2
Orientation:reverse strand
Alignment:--AAGAGTYCTGCMAAGC
TTGAGTGSTT--------
 A C G T A C G T G T C A C G T A C T A G C T G A A C T G C A G T A G T C A T G C A C G T A T C G A T G C T G A C G T C A C T G A C T A G A G T C
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T