Information for 10-CCTGCTTGAA (Motif 33)

A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C C G T A C G T A A C T G A G T C C G T A A C T G A C T G
p-value:1e-5
log p-value:-1.241e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets30.7 +/- 2.1bp
Average Position of motif in Background76.9 +/- 9.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCTGCTTGAA----
NNANTGATTGATNNNN
 A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

Pax6/MA0069.1/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CCTGCTTGAA
AANTCATGCGTGAA
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C T G C G T A C G T A
G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A

Dux/MA0611.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCTGCTTGAA
-TTGATTGN-
 A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C T G C G T A C G T A
A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTTGAA
CCCCCTGCTGTG-
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C T G C G T A C G T A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCTGCTTGAA
--TGCGTG--
 A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C T G C G T A C G T A
A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTTGAA
NCACCTGTN----
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C T G C G T A C G T A
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CCTGCTTGAA
SNGCACCTGCHS---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C T G C G T A C G T A
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCTGCTTGAA----
NNANTGATTGATNTTN
 A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

PH0171.1_Nkx2-1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCTGCTTGAA---
TAAGCCACTTGAAATT
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C T G C G T A C G T A A C G T A C G T A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

PH0111.1_Nkx2-2/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCTGCTTGAA----
ATAACCACTTGAAAATT
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T