Information for 8-CATTGGTCGA (Motif 27)

A T G C C G T A C G A T A C G T A C T G A C T G G A C T A T G C C T A G C G T A
Reverse Opposite:
A C G T A G T C A T C G C G T A A G T C A G T C C G T A C G T A A C G T A T C G
p-value:1e-8
log p-value:-1.905e+01
Information Content per bp:1.872
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.0 +/- 17.8bp
Average Position of motif in Background54.4 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYB/MA0502.1/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CATTGGTCGA---
CTGATTGGTCNATTT
 A C G T A C G T A T G C C G T A C G A T A C G T A C T G A C T G G A C T A T G C C T A G C G T A A C G T A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CATTGGTCGA
CCGATTGGCT--
 A C G T A C G T A T G C C G T A C G A T A C G T A C T G A C T G G A C T A T G C C T A G C G T A
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CATTGGTCGA-
TGATTGGCTANN
 A C G T A T G C C G T A C G A T A C G T A C T G A C T G G A C T A T G C C T A G C G T A A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.68
Offset:-8
Orientation:forward strand
Alignment:--------CATTGGTCGA
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A C G A T A C G T A C T G A C T G G A C T A T G C C T A G C G T A
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CATTGGTCGA
CCATTGTTYB-
 A C G T A T G C C G T A C G A T A C G T A C T G A C T G G A C T A T G C C T A G C G T A
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T

SOX9/MA0077.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CATTGGTCGA
CCATTGTTC--
 A C G T A T G C C G T A C G A T A C G T A C T G A C T G G A C T A T G C C T A G C G T A
A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CATTGGTCGA
NCCATTGTTC--
 A C G T A C G T A T G C C G T A C G A T A C G T A C T G A C T G G A C T A T G C C T A G C G T A
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CATTGGTCGA-
ANNTCCATTGTTCNNN
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A C G A T A C G T A C T G A C T G G A C T A T G C C T A G C G T A A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CATTGGTCGA-
-ATTGCGCAAC
 A T G C C G T A C G A T A C G T A C T G A C T G G A C T A T G C C T A G C G T A A C G T
A C G T T G C A A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A G T C

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CATTGGTCGA
NCCATTGTTY--
 A C G T A C G T A T G C C G T A C G A T A C G T A C T G A C T G G A C T A T G C C T A G C G T A
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T