Information for 11-TACACAGTGTTAA (Motif 23)

C G A T C G T A A G T C C G T A A G T C C G T A A C T G A C G T A C T G A C G T C G A T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A T C G A A G T C C G T A A G T C C G A T A C T G A C G T A C T G C G A T C G T A
p-value:1e-8
log p-value:-2.010e+01
Information Content per bp:1.932
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.7 +/- 21.8bp
Average Position of motif in Background22.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TACACAGTGTTAA
---AAGGTGTKAA
 C G A T C G T A A G T C C G T A A G T C C G T A A C T G A C G T A C T G A C G T C G A T C G T A C G T A
A C G T A C G T A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A

PB0109.1_Bbx_2/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TACACAGTGTTAA------
--NNNNCTGTTAACNNTNN
 C G A T C G T A A G T C C G T A A G T C C G T A A C T G A C G T A C T G A C G T C G A T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TACACAGTGTTAA-
----AGGTGTTAAT
 C G A T C G T A A G T C C G T A A G T C C G T A A C T G A C G T A C T G A C G T C G A T C G T A C G T A A C G T
A C G T A C G T A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T

Ar/MA0007.3/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TACACAGTGTTAA-
NGGTACACNGTGTTCCC
 A C G T A C G T A C G T C G A T C G T A A G T C C G T A A G T C C G T A A C T G A C G T A C T G A C G T C G A T C G T A C G T A A C G T
C T A G C T A G C T A G G C A T C G T A T A G C C T G A A G T C A T G C T C A G A G C T A T C G A C G T C G A T G A T C G A T C G A T C

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TACACAGTGTTAA
AAGAACATWHTGTTC-
 A C G T A C G T A C G T C G A T C G T A A G T C C G T A A G T C C G T A A C T G A C G T A C T G A C G T C G A T C G T A C G T A
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C A C G T

NR3C1/MA0113.3/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TACACAGTGTTAA-
GGGTACATAATGTTCCC
 A C G T A C G T A C G T C G A T C G T A A G T C C G T A A G T C C G T A A C T G A C G T A C T G A C G T C G A T C G T A C G T A A C G T
C T A G C T A G C T A G C G A T C G T A A T G C C T G A G A C T C G T A C T G A G A C T A T C G A C G T G C A T G A T C G A T C G T A C

NR3C2/MA0727.1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TACACAGTGTTAA-
GGGAACACAATGTTCCC
 A C G T A C G T A C G T C G A T C G T A A G T C C G T A A G T C C G T A A C T G A C G T A C T G A C G T C G A T C G T A C G T A A C G T
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C

TBX2/MA0688.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TACACAGTGTTAA-
---AAGGTGTGAAA
 C G A T C G T A A G T C C G T A A G T C C G T A A C T G A C G T A C T G A C G T C G A T C G T A C G T A A C G T
A C G T A C G T A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TACACAGTGTTAA
VAGRACAKWCTGTYC-
 A C G T A C G T A C G T C G A T C G T A A G T C C G T A A G T C C G T A A C T G A C G T A C T G A C G T C G A T C G T A C G T A
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TACACAGTGTTAA
--CACAGN-----
 C G A T C G T A A G T C C G T A A G T C C G T A A C T G A C G T A C T G A C G T C G A T C G T A C G T A
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T