Information for 6-CTCCTTAAGA (Motif 21)

A T G C A C G T A G T C G T A C A C G T A C G T C G T A C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A C G T C G T A C G T A A C T G A C T G C G T A A T C G
p-value:1e-8
log p-value:-2.034e+01
Information Content per bp:1.937
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif13.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets48.1 +/- 30.0bp
Average Position of motif in Background46.7 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F2/MA0793.1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CTCCTTAAGA
AGCTCATTAT--
 A C G T A C G T A T G C A C G T A G T C G T A C A C G T A C G T C G T A C G T A A C T G C G T A
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----CTCCTTAAGA--
NNNACCTCATTATCNTN
 A C G T A C G T A C G T A C G T A C G T A T G C A C G T A G T C G T A C A C G T A C G T C G T A C G T A A C T G C G T A A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

NKX6-1/MA0674.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CTCCTTAAGA
GTAATTAA--
 A T G C A C G T A G T C G T A C A C G T A C G T C G T A C G T A A C T G C G T A
T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A A C G T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CTCCTTAAGA--
GCAACCTCATTATNNNN
 A C G T A C G T A C G T A C G T A C G T A T G C A C G T A G T C G T A C A C G T A C G T C G T A C G T A A C T G C G T A A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

PH0150.1_Pou4f3/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CTCCTTAAGA---
GACNTCATTAATAANN
 A C G T A C G T A C G T A T G C A C G T A G T C G T A C A C G T A C G T C G T A C G T A A C T G C G T A A C G T A C G T A C G T
C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T

LBX1/MA0618.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTCCTTAAGA
CTAATTAA--
 A T G C A C G T A G T C G T A C A C G T A C G T C G T A C G T A A C T G C G T A
T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A A C G T A C G T

HOXC10/MA0905.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTCCTTAAGA
GTCGTAAAAT
 A T G C A C G T A G T C G T A C A C G T A C G T C G T A C G T A A C T G C G T A
T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T

NKX6-2/MA0675.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTCCTTAAGA
CTAATTAA--
 A T G C A C G T A G T C G T A C A C G T A C G T C G T A C G T A A C T G C G T A
A T G C G A C T G T C A G C T A C G A T G C A T C T G A G C T A A C G T A C G T

PH0175.1_Vax2/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CTCCTTAAGA-
GTGCACTAATTAAGAC
 A C G T A C G T A C G T A C G T A C G T A T G C A C G T A G T C G T A C A C G T A C G T C G T A C G T A A C T G C G T A A C G T
A C T G C G A T T A C G A T G C T C G A A G T C G A C T G T C A C G T A C G A T A C G T C G T A T C G A A C T G T C G A T A G C

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTCCTTAAGA
-YCATTAMC-
 A T G C A C G T A G T C G T A C A C G T A C G T C G T A C G T A A C T G C G T A
A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T