Information for 5-GATACACAGG (Motif 20)

A C T G C G T A G C A T C T G A G T A C C G T A A T G C C G T A C T A G C T A G
Reverse Opposite:
G A T C G A T C A C G T A T C G A C G T A C T G A G C T C G T A A C G T A G T C
p-value:1e-8
log p-value:-2.069e+01
Information Content per bp:1.848
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif87.6
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets47.7 +/- 27.7bp
Average Position of motif in Background47.2 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GATACACAGG
NTTGATACATT--
 A C G T A C G T A C G T A C T G C G T A G C A T C T G A G T A C C G T A A T G C C G T A C T A G C T A G
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GATACACAGG
TCCAATCCACA--
 A C G T A C G T A C G T A C T G C G T A G C A T C T G A G T A C C G T A A T G C C G T A C T A G C T A G
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GATACACAGG
AAAACAAAGG
 A C T G C G T A G C A T C T G A G T A C C G T A A T G C C G T A C T A G C T A G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GATACACAGG
WWATRTAAACAN-
 A C G T A C G T A C G T A C T G C G T A G C A T C T G A G T A C C G T A A T G C C G T A C T A G C T A G
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GATACACAGG
SSAATCCACANN
 A C G T A C G T A C T G C G T A G C A T C T G A G T A C C G T A A T G C C G T A C T A G C T A G
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GATACACAGG
----CACAGN
 A C T G C G T A G C A T C T G A G T A C C G T A A T G C C G T A C T A G C T A G
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

FOXL1/MA0033.2/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GATACACAGG
-GTAAACA--
 A C T G C G T A G C A T C T G A G T A C C G T A A T G C C G T A C T A G C T A G
A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A A C G T A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GATACACAGG
WWTRTAAACAVG
 A C G T A C G T A C T G C G T A G C A T C T G A G T A C C G T A A T G C C G T A C T A G C T A G
C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G

Foxo1/MA0480.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GATACACAGG-
TGTAAACAGGA
 A C T G C G T A G C A T C T G A G T A C C G T A A T G C C G T A C T A G C T A G A C G T
C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A

Foxj2/MA0614.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GATACACAGG
-GTAAACAA-
 A C T G C G T A G C A T C T G A G T A C C G T A A T G C C G T A C T A G C T A G
A C G T C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A A C G T