p-value: | 1e-9 |
log p-value: | -2.180e+01 |
Information Content per bp: | 1.854 |
Number of Target Sequences with motif | 10.0 |
Percentage of Target Sequences with motif | 1.39% |
Number of Background Sequences with motif | 37.8 |
Percentage of Background Sequences with motif | 0.08% |
Average Position of motif in Targets | 57.0 +/- 26.8bp |
Average Position of motif in Background | 51.9 +/- 31.1bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 1 |
Score: | 0.77 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AGGTCATACT TRAGGTCA---- |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 2 |
Score: | 0.75 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGGTCATACT AGGTCA---- |
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RORA/MA0071.1/Jaspar
Match Rank: | 3 |
Score: | 0.74 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----AGGTCATACT ATCAAGGTCA---- |
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Esrrg/MA0643.1/Jaspar
Match Rank: | 4 |
Score: | 0.73 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AGGTCATACT TCAAGGTCAT--- |
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PB0014.1_Esrra_1/Jaspar
Match Rank: | 5 |
Score: | 0.72 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------AGGTCATACT- TATTCAAGGTCATGCGA |
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ESRRB/MA0141.3/Jaspar
Match Rank: | 6 |
Score: | 0.72 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AGGTCATACT TCAAGGTCATA-- |
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COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
Match Rank: | 7 |
Score: | 0.72 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AGGTCATACT AGRGGTCA---- |
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Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer
Match Rank: | 8 |
Score: | 0.71 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---AGGTCATACT TCAAGGTCAN--- |
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MAFG::NFE2L1/MA0089.1/Jaspar
Match Rank: | 9 |
Score: | 0.71 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AGGTCATACT --GTCATN-- |
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Esrra/MA0592.2/Jaspar
Match Rank: | 10 |
Score: | 0.70 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----AGGTCATACT TTCAAGGTCAT--- |
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