Information for 9-TTGTCTGGCTCAGCCA (Motif 13)

A C G T C G A T A T C G C G A T A T G C C A G T C T A G A C T G G T A C G C A T A G T C T C G A A T C G G T A C G A T C G C T A
Reverse Opposite:
C A G T C A T G C A T G A T G C A C G T T A C G C G T A A C T G G T A C A G T C G T C A T A C G G C T A A T G C C G T A T G C A
p-value:1e-10
log p-value:-2.473e+01
Information Content per bp:1.681
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.67%
Number of Background Sequences with motif49.4
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets49.8 +/- 22.9bp
Average Position of motif in Background54.4 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTGTCTGGCTCAGCCA
NNTNNTGTCTGGNNTNG---
 A C G T A C G T A C G T A C G T A C G T C G A T A T C G C G A T A T G C C A G T C T A G A C T G G T A C G C A T A G T C T C G A A T C G G T A C G A T C G C T A
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T A C G T A C G T

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:2
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TTGTCTGGCTCAGCCA
-----TGACTCAGCA-
 A C G T C G A T A T C G C G A T A T G C C A G T C T A G A C T G G T A C G C A T A G T C T C G A A T C G G T A C G A T C G C T A
A C G T A C G T A C G T A C G T A C G T A G C T A C T G C G T A A T G C C G A T G T A C C T G A A C T G A T G C G C T A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTGTCTGGCTCAGCCA
CTGTCTGG--------
 A C G T C G A T A T C G C G A T A T G C C A G T C T A G A C T G G T A C G C A T A G T C T C G A A T C G G T A C G A T C G C T A
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TTGTCTGGCTCAGCCA
-TGTCTGDCACCT---
 A C G T C G A T A T C G C G A T A T G C C A G T C T A G A C T G G T A C G C A T A G T C T C G A A T C G G T A C G A T C G C T A
A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTGTCTGGCTCAGCCA
TWGTCTGV--------
 A C G T C G A T A T C G C G A T A T G C C A G T C T A G A C T G G T A C G C A T A G T C T C G A A T C G G T A C G A T C G C T A
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTGTCTGGCTCAGCCA
-TGATTGGCTANN---
 A C G T C G A T A T C G C G A T A T G C C A G T C T A G A C T G G T A C G C A T A G T C T C G A A T C G G T A C G A T C G C T A
A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TTGTCTGGCTCAGCCA
-GGTCTGGCAT-----
 A C G T C G A T A T C G C G A T A T G C C A G T C T A G A C T G G T A C G C A T A G T C T C G A A T C G G T A C G A T C G C T A
A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:8
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TTGTCTGGCTCAGCCA
----ATGACTCAGCAD
 A C G T C G A T A T C G C G A T A T G C C A G T C T A G A C T G G T A C G C A T A G T C T C G A A T C G G T A C G A T C G C T A
A C G T A C G T A C G T A C G T T C G A C G A T A C T G G C T A T A G C C G A T G T A C C G T A A C T G T G A C C G T A C A G T

Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TTGTCTGGCTCAGCCA---
----ATGACTCAGCANWWT
 A C G T C G A T A T C G C G A T A T G C C A G T C T A G A C T G G T A C G C A T A G T C T C G A A T C G G T A C G A T C G C T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A C G T A C T G C G T A T A G C G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T

RHOXF1/MA0719.1/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TTGTCTGGCTCAGCCA
-----NGGATTAN---
 A C G T C G A T A T C G C G A T A T G C C A G T C T A G A C T G G T A C G C A T A G T C T C G A A T C G G T A C G A T C G C T A
A C G T A C G T A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T