Information for 1-SNNDGGGRAWTYCCCY (Motif 1)

T A C G T A G C A T G C C T A G C T A G C T A G C A T G T C G A T G C A G C T A A C G T A G C T G T A C G T A C G T A C A G T C
Reverse Opposite:
C T A G C A T G A C T G C A T G C T G A T G C A C G A T A C G T A G C T G T A C A G T C G A T C G A T C T A C G A T C G A T G C
p-value:1e-37
log p-value:-8.705e+01
Information Content per bp:1.525
Number of Target Sequences with motif102.0
Percentage of Target Sequences with motif14.19%
Number of Background Sequences with motif1454.9
Percentage of Background Sequences with motif2.96%
Average Position of motif in Targets49.4 +/- 16.8bp
Average Position of motif in Background49.9 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:1
Score:0.92
Offset:4
Orientation:reverse strand
Alignment:SNNDGGGRAWTYCCCY
----GGGAAATCCCCN
 T A C G T A G C A T G C C T A G C T A G C T A G C A T G T C G A T G C A G C T A A C G T A G C T G T A C G T A C G T A C A G T C
A C G T A C G T A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

NFKB2/MA0778.1/Jaspar

Match Rank:2
Score:0.90
Offset:3
Orientation:forward strand
Alignment:SNNDGGGRAWTYCCCY
---AGGGGATTCCCCT
 T A C G T A G C A T G C C T A G C T A G C T A G C A T G T C G A T G C A G C T A A C G T A G C T G T A C G T A C G T A C A G T C
A C G T A C G T A C G T T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.88
Offset:5
Orientation:reverse strand
Alignment:SNNDGGGRAWTYCCCY
-----GGAAATCCCC-
 T A C G T A G C A T G C C T A G C T A G C T A G C A T G T C G A T G C A G C T A A C G T A G C T G T A C G T A C G T A C A G T C
A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:4
Score:0.88
Offset:3
Orientation:forward strand
Alignment:SNNDGGGRAWTYCCCY
---GGGGGAATCCCC-
 T A C G T A G C A T G C C T A G C T A G C T A G C A T G T C G A T G C A G C T A A C G T A G C T G T A C G T A C G T A C A G T C
A C G T A C G T A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.85
Offset:5
Orientation:reverse strand
Alignment:SNNDGGGRAWTYCCCY
-----GGAAATTCCC-
 T A C G T A G C A T G C C T A G C T A G C T A G C A T G T C G A T G C A G C T A A C G T A G C T G T A C G T A C G T A C A G T C
A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:6
Score:0.84
Offset:3
Orientation:forward strand
Alignment:SNNDGGGRAWTYCCCY
---AGGGGAATCCCCT
 T A C G T A G C A T G C C T A G C T A G C T A G C A T G T C G A T G C A G C T A A C G T A G C T G T A C G T A C G T A C A G T C
A C G T A C G T A C G T T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.83
Offset:5
Orientation:reverse strand
Alignment:SNNDGGGRAWTYCCCY
-----GGAAANCCCC-
 T A C G T A G C A T G C C T A G C T A G C T A G C A T G T C G A T G C A G C T A A C G T A G C T G T A C G T A C G T A C A G T C
A C G T A C G T A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.83
Offset:5
Orientation:forward strand
Alignment:SNNDGGGRAWTYCCCY
-----GGAAATTCCC-
 T A C G T A G C A T G C C T A G C T A G C T A G C A T G T C G A T G C A G C T A A C G T A G C T G T A C G T A C G T A C A G T C
A C G T A C G T A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:SNNDGGGRAWTYCCCY
---TGGGGA-------
 T A C G T A G C A T G C C T A G C T A G C T A G C A T G T C G A T G C A G C T A A C G T A G C T G T A C G T A C G T A C A G T C
A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:SNNDGGGRAWTYCCCY-
-NNNGGGGCGCCCCCNN
 T A C G T A G C A T G C C T A G C T A G C T A G C A T G T C G A T G C A G C T A A C G T A G C T G T A C G T A C G T A C A G T C A C G T
A C G T A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A