Information for 6-CCCTGTGTAAGGTGTT (Motif 16)

A G T C A G T C A G T C A C G T A C T G A C G T A C T G A C G T C T G A C G T A A C T G A C T G A G C T A C T G A C G T A C G T
Reverse Opposite:
G T C A G T C A G T A C C T G A A G T C G T A C A C G T A G C T C G T A A G T C C G T A A G T C C G T A A C T G A C T G C T A G
p-value:1e-6
log p-value:-1.418e+01
Information Content per bp:1.893
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.8 +/- 29.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCCTGTGTAAGGTGTT
-GCTGTG---------
 A G T C A G T C A G T C A C G T A C T G A C G T A C T G A C G T C T G A C G T A A C T G A C T G A G C T A C T G A C G T A C G T
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:2
Score:0.52
Offset:9
Orientation:forward strand
Alignment:CCCTGTGTAAGGTGTT-
---------AGGTGTGA
 A G T C A G T C A G T C A C G T A C T G A C G T A C T G A C G T C T G A C G T A A C T G A C T G A G C T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CCCTGTGTAAGGTGTT
--CTTTGT--------
 A G T C A G T C A G T C A C G T A C T G A C G T A C T G A C G T C T G A C G T A A C T G A C T G A G C T A C T G A C G T A C G T
A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:4
Score:0.51
Offset:9
Orientation:forward strand
Alignment:CCCTGTGTAAGGTGTT-
---------AGGTGTGA
 A G T C A G T C A G T C A C G T A C T G A C G T A C T G A C G T C T G A C G T A A C T G A C T G A G C T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CCCTGTGTAAGGTGTT
-CCTTTGTT-------
 A G T C A G T C A G T C A C G T A C T G A C G T A C T G A C G T C T G A C G T A A C T G A C T G A G C T A C T G A C G T A C G T
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CCCTGTGTAAGGTGTT
AGGVNCCTTTGT--------
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C T G A C G T A C T G A C G T C T G A C G T A A C T G A C T G A G C T A C T G A C G T A C G T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:7
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CCCTGTGTAAGGTGTT
GNCTATAAAAGG----
 A G T C A G T C A G T C A C G T A C T G A C G T A C T G A C G T C T G A C G T A A C T G A C T G A G C T A C T G A C G T A C G T
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:8
Score:0.50
Offset:8
Orientation:forward strand
Alignment:CCCTGTGTAAGGTGTT---
--------AAGGTGTGAAA
 A G T C A G T C A G T C A C G T A C T G A C G T A C T G A C G T C T G A C G T A A C T G A C T G A G C T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.50
Offset:9
Orientation:forward strand
Alignment:CCCTGTGTAAGGTGTT-
---------AGGTGTCA
 A G T C A G T C A G T C A C G T A C T G A C G T A C T G A C G T C T G A C G T A A C T G A C T G A G C T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A

REST/MA0138.2/Jaspar

Match Rank:10
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGTGTAAGGTGTT---
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A G T C A G T C A G T C A C G T A C T G A C G T A C T G A C G T C T G A C G T A A C T G A C T G A G C T A C T G A C G T A C G T A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A