Information for 7-TCGGTAAACG (Motif 9)

A C G T G T A C A C T G T C A G C A G T C T G A C G T A G T C A A G T C C T A G
Reverse Opposite:
A G T C A C T G A C G T A C G T A G C T G T C A A G T C A G T C A C T G C G T A
p-value:1e-13
log p-value:-3.190e+01
Information Content per bp:1.799
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.1 +/- 26.2bp
Average Position of motif in Background42.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BARHL2/MA0635.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TCGGTAAACG--
--GCTAAACGGT
 A C G T G T A C A C T G T C A G C A G T C T G A C G T A G T C A A G T C C T A G A C G T A C G T
A C G T A C G T T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

HOXD12/MA0873.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TCGGTAAACG
AGTCGTAAAAA-
 A C G T A C G T A C G T G T A C A C T G T C A G C A G T C T G A C G T A G T C A A G T C C T A G
T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A A C G T

HOXC12/MA0906.1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TCGGTAAACG
GGTCGTAAAAA-
 A C G T A C G T A C G T G T A C A C T G T C A G C A G T C T G A C G T A G T C A A G T C C T A G
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TCGGTAAACG
GGTCGTAAAAT-
 A C G T A C G T A C G T G T A C A C T G T C A G C A G T C T G A C G T A G T C A A G T C C T A G
C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCGGTAAACG
GTCGTAAAAA-
 A C G T A C G T G T A C A C T G T C A G C A G T C T G A C G T A G T C A A G T C C T A G
T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A A C G T

FOXD2/MA0847.1/Jaspar

Match Rank:6
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TCGGTAAACG
---GTAAACA
 A C G T G T A C A C T G T C A G C A G T C T G A C G T A G T C A A G T C C T A G
A C G T A C G T A C G T T C A G G A C T G T C A G T C A C G T A A G T C C T G A

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TCGGTAAACG---
-NDGTAAACARRN
 A C G T G T A C A C T G T C A G C A G T C T G A C G T A G T C A A G T C C T A G A C G T A C G T A C G T
A C G T G C A T C T A G T C A G A C G T C G T A C G T A C G T A A G T C C G T A T C A G T C A G C T G A

HOXC13/MA0907.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TCGGTAAACG
GCTCGTAAAAA-
 A C G T A C G T A C G T G T A C A C T G T C A G C A G T C T G A C G T A G T C A A G T C C T A G
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TCGGTAAACG-
---GTAAACAA
 A C G T G T A C A C T G T C A G C A G T C T G A C G T A G T C A A G T C C T A G A C G T
A C G T A C G T A C G T C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A

FOXO6/MA0849.1/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TCGGTAAACG
---GTAAACA
 A C G T G T A C A C T G T C A G C A G T C T G A C G T A G T C A A G T C C T A G
A C G T A C G T A C G T C T A G C G A T T G C A G T C A C G T A A G T C C T G A