Information for 6-GGTTTAAATT (Motif 6)

C T A G A C T G A G C T A C G T A C G T T C G A C G T A C G T A A C G T A G C T
Reverse Opposite:
C T G A C G T A A C G T A C G T A C G T C G T A C G T A C T G A G T A C A G T C
p-value:1e-15
log p-value:-3.676e+01
Information Content per bp:1.870
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.5 +/- 17.9bp
Average Position of motif in Background59.9 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.79
Offset:1
Orientation:forward strand
Alignment:GGTTTAAATT
-ATTTGAATT
 C T A G A C T G A G C T A C G T A C G T T C G A C G T A C G T A A C G T A G C T
A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

PH0124.1_Obox5_1/Jaspar

Match Rank:2
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----GGTTTAAATT--
TAGAGGGATTAAATTTC
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G A G C T A C G T A C G T T C G A C G T A C G T A A C G T A G C T A C G T A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

PB0171.1_Sox18_2/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GGTTTAAATT------
NNNNTGAATTCANNNC
 C T A G A C T G A G C T A C G T A C G T T C G A C G T A C G T A A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C

PH0125.1_Obox5_2/Jaspar

Match Rank:4
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----GGTTTAAATT--
NANAGGGATTAATTATN
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G A G C T A C G T A C G T T C G A C G T A C G T A A C G T A G C T A C G T A C G T
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GGTTTAAATT--
--TTTGAAACCG
 C T A G A C T G A G C T A C G T A C G T T C G A C G T A C G T A A C G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGTTTAAATT--
AGTTTCAKTTTC
 C T A G A C T G A G C T A C G T A C G T T C G A C G T A C G T A A C G T A G C T A C G T A C G T
C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C

PB0068.1_Sox1_1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGTTTAAATT----
NNNTATTGAATTGNNN
 A C G T A C G T C T A G A C T G A G C T A C G T A C G T T C G A C G T A C G T A A C G T A G C T A C G T A C G T A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

PH0129.1_Otx1/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GGTTTAAATT--
AGAGGGGATTAATTTAT
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G A G C T A C G T A C G T T C G A C G T A C G T A A C G T A G C T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGTTTAAATT
TGGTTTCAGT-
 A C G T C T A G A C T G A G C T A C G T A C G T T C G A C G T A C G T A A C G T A G C T
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGTTTAAATT
GGGATTAA---
 A C G T C T A G A C T G A G C T A C G T A C G T T C G A C G T A C G T A A C G T A G C T
C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T A C G T