Information for 25-CAGCGGACTCCGC (Motif 39)

T A G C G T C A A T C G T A G C A T C G T C A G T G C A A T G C A C G T A T G C G A T C A T C G T A G C
Reverse Opposite:
A T C G T A G C C T A G T A C G T G C A T A C G A C G T A G T C A T G C A T C G T A G C C A G T A T C G
p-value:1e-6
log p-value:-1.470e+01
Information Content per bp:1.538
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.2 +/- 26.1bp
Average Position of motif in Background54.2 +/- 12.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CAGCGGACTCCGC
NCGCGGACGTTG-
T A G C G T C A A T C G T A G C A T C G T C A G T G C A A T G C A C G T A T G C G A T C A T C G T A G C
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CAGCGGACTCCGC-
--GCTGASTCAGCA
T A G C G T C A A T C G T A G C A T C G T C A G T G C A A T G C A C G T A T G C G A T C A T C G T A G C A C G T
A C G T A C G T T C A G T A G C G A C T C A T G C T G A A T C G G C A T G T A C C G T A A C T G T A G C T G C A

MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CAGCGGACTCCGC---
RAAWNTGCTGASTCAGCANW
A C G T A C G T A C G T A C G T T A G C G T C A A T C G T A G C A T C G T C A G T G C A A T G C A C G T A T G C G A T C A T C G T A G C A C G T A C G T A C G T
C T G A C G T A C G T A C G T A G A T C C G A T T A C G G T A C G C A T C A T G C G T A A T G C G C A T G T A C C G T A C A T G A T G C G C T A C T G A G C A T

MAFG/MA0659.1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CAGCGGACTCCGC-----
AATNTGCTGACTCAGCANTTT
A C G T A C G T A C G T T A G C G T C A A T C G T A G C A T C G T C A G T G C A A T G C A C G T A T G C G A T C A T C G T A G C A C G T A C G T A C G T A C G T A C G T
C G T A C G T A G C A T C G T A G A C T T A C G G T A C G A C T C A T G G T C A T A G C C G A T G T A C C T G A C A T G A T G C C T G A G C T A C G A T G C A T G C A T

NFKB1/MA0105.4/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAGCGGACTCCGC-
-AGGGGAATCCCCT
T A G C G T C A A T C G T A G C A T C G T C A G T G C A A T G C A C G T A T G C G A T C A T C G T A G C A C G T
A C G T T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

Myod1/MA0499.1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CAGCGGACTCCGC
TGCAGCTGTCCCT--
A C G T A C G T T A G C G T C A A T C G T A G C A T C G T C A G T G C A A T G C A C G T A T G C G A T C A T C G T A G C
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAGCGGACTCCGC
HCAGCTGDTN----
A C G T T A G C G T C A A T C G T A G C A T C G T C A G T G C A A T G C A C G T A T G C G A T C A T C G T A G C
G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CAGCGGACTCCGC
AGCAGCTGCTNN---
A C G T A C G T T A G C G T C A A T C G T A G C A T C G T C A G T G C A A T G C A C G T A T G C G A T C A T C G T A G C
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CAGCGGACTCCGC-
-AGGGGAATCCCCT
T A G C G T C A A T C G T A G C A T C G T C A G T G C A A T G C A C G T A T G C G A T C A T C G T A G C A C G T
A C G T T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CAGCGGACTCCGC-
--GGGGATTCCCCC
T A G C G T C A A T C G T A G C A T C G T C A G T G C A A T G C A C G T A T G C G A T C A T C G T A G C A C G T
A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C