Information for 15-CAGCCTTTCTCTC (Motif 25)

A G T C T C G A T A C G G T A C G A T C G A C T A G C T A C G T T A G C A C G T A G T C G A C T G T A C
Reverse Opposite:
C A T G C G T A A C T G C G T A A T C G C G T A C T G A C T G A C T A G A C T G A T G C A C G T C T A G
p-value:1e-11
log p-value:-2.635e+01
Information Content per bp:1.784
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif14.9
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets49.4 +/- 29.3bp
Average Position of motif in Background58.6 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CAGCCTTTCTCTC
---CCTTTGTTTT
 A G T C T C G A T A C G G T A C G A T C G A C T A G C T A C G T T A G C A C G T A G T C G A C T G T A C
A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CAGCCTTTCTCTC
NNGCACCTTTCTCC-
 A C G T A C G T A G T C T C G A T A C G G T A C G A T C G A C T A G C T A C G T T A G C A C G T A G T C G A C T G T A C
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CAGCCTTTCTCTC--
---ACTTTCACTTTC
 A G T C T C G A T A C G G T A C G A T C G A C T A G C T A C G T T A G C A C G T A G T C G A C T G T A C A C G T A C G T
A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

Sox2/MA0143.3/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CAGCCTTTCTCTC
---CCTTTGTT--
 A G T C T C G A T A C G G T A C G A T C G A C T A G C T A C G T T A G C A C G T A G T C G A C T G T A C
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CAGCCTTTCTCTC
--NCCATTGTTY-
 A G T C T C G A T A C G G T A C G A T C G A C T A G C T A C G T T A G C A C G T A G T C G A C T G T A C
A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CAGCCTTTCTCTC
---CCWTTGTY--
 A G T C T C G A T A C G G T A C G A T C G A C T A G C T A C G T T A G C A C G T A G T C G A C T G T A C
A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CAGCCTTTCTCTC
---CCATTGTTTT
 A G T C T C G A T A C G G T A C G A T C G A C T A G C T A C G T T A G C A C G T A G T C G A C T G T A C
A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

PB0166.1_Sox12_2/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CAGCCTTTCTCTC---
ANTCCTTTGTCTNNNN
 A G T C T C G A T A C G G T A C G A T C G A C T A G C T A C G T T A G C A C G T A G T C G A C T G T A C A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Gata4/MA0482.1/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CAGCCTTTCTCTC--
----TCTTATCTCCC
 A G T C T C G A T A C G G T A C G A T C G A C T A G C T A C G T T A G C A C G T A G T C G A C T G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CAGCCTTTCTCTC
---NNCTTATCTN
 A G T C T C G A T A C G G T A C G A T C G A C T A G C T A C G T T A G C A C G T A G T C G A C T G T A C
A C G T A C G T A C G T A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C