Information for 13-TAGTGGGCTTAAG (Motif 23)

C G A T C T G A A C T G A C G T A C T G C T A G A C T G A G T C A C G T A C G T G C T A C G T A A C T G
Reverse Opposite:
A G T C A C G T C A G T G T C A C G T A A C T G A G T C A G T C A G T C G T C A T A G C A G C T C G T A
p-value:1e-11
log p-value:-2.716e+01
Information Content per bp:1.829
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.0 +/- 24.6bp
Average Position of motif in Background28.6 +/- 9.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0121.1_Obox1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TAGTGGGCTTAAG---
TTAAGGGGATTAACTAC
 A C G T C G A T C T G A A C T G A C G T A C T G C T A G A C T G A G T C A C G T A C G T G C T A C G T A A C T G A C G T A C G T A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

PITX3/MA0714.1/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TAGTGGGCTTAAG
----GGGATTANN
 C G A T C T G A A C T G A C G T A C T G C T A G A C T G A G T C A C G T A C G T G C T A C G T A A C T G
A C G T A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

PH0137.1_Pitx1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TAGTGGGCTTAAG---
TTAGAGGGATTAACAAT
 A C G T C G A T C T G A A C T G A C G T A C T G C T A G A C T G A G T C A C G T A C G T G C T A C G T A A C T G A C G T A C G T A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

PH0122.1_Obox2/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TAGTGGGCTTAAG---
TGAGGGGGATTAACTAT
 A C G T C G A T C T G A A C T G A C G T A C T G C T A G A C T G A G T C A C G T A C G T G C T A C G T A A C T G A C G T A C G T A C G T
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T

PH0124.1_Obox5_1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TAGTGGGCTTAAG----
TAGAGGGATTAAATTTC
 C G A T C T G A A C T G A C G T A C T G C T A G A C T G A G T C A C G T A C G T G C T A C G T A A C T G A C G T A C G T A C G T A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

PH0123.1_Obox3/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TAGTGGGCTTAAG---
TGAGGGGGATTAACTAT
 A C G T C G A T C T G A A C T G A C G T A C T G C T A G A C T G A G T C A C G T A C G T G C T A C G T A A C T G A C G T A C G T A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T

Pitx1/MA0682.1/Jaspar

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TAGTGGGCTTAAG
----GGGATTAA-
 C G A T C T G A A C T G A C G T A C T G C T A G A C T G A G T C A C G T A C G T G C T A C G T A A C T G
A C G T A C G T A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TAGTGGGCTTAAG
---NGGGATTA--
 C G A T C T G A A C T G A C G T A C T G C T A G A C T G A G T C A C G T A C G T G C T A C G T A A C T G
A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T

PB0143.1_Klf7_2/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TAGTGGGCTTAAG---
NNNTNGGGCGTATNNTN
 A C G T C G A T C T G A A C T G A C G T A C T G C T A G A C T G A G T C A C G T A C G T G C T A C G T A A C T G A C G T A C G T A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TAGTGGGCTTAAG--
NNATTGGACTTTNGNN
 A C G T C G A T C T G A A C T G A C G T A C T G C T A G A C T G A G T C A C G T A C G T G C T A C G T A A C T G A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C