Information for 13-ATAGCCGAAC (Motif 20)

T C G A A C G T G T C A A T C G A G T C G A T C C A T G C G T A G T C A G T A C
Reverse Opposite:
A C T G C A G T A C G T G T A C C T A G A C T G A T G C C A G T G T C A A G C T
p-value:1e-12
log p-value:-2.909e+01
Information Content per bp:1.734
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.59%
Number of Background Sequences with motif14.6
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets51.4 +/- 28.4bp
Average Position of motif in Background41.6 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ATAGCCGAAC
-CAGCC----
 T C G A A C G T G T C A A T C G A G T C G A T C C A T G C G T A G T C A G T A C
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATAGCCGAAC
CGTGCCAAG-
 T C G A A C G T G T C A A T C G A G T C G A T C C A T G C G T A G T C A G T A C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ATAGCCGAAC
--TGCCAA--
 T C G A A C G T G T C A A T C G A G T C G A T C C A T G C G T A G T C A G T A C
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ATAGCCGAAC
ATTGCGCAAC
 T C G A A C G T G T C A A T C G A G T C G A T C C A T G C G T A G T C A G T A C
T G C A A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A G T C

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ATAGCCGAAC
GGTGCCAAGT
 T C G A A C G T G T C A A T C G A G T C G A T C C A T G C G T A G T C A G T A C
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

PB0121.1_Foxj3_2/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-ATAGCCGAAC------
AACACCAAAACAAAGGA
 A C G T T C G A A C G T G T C A A T C G A G T C G A T C C A T G C G T A G T C A G T A C A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

CEBPA/MA0102.3/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ATAGCCGAAC-
ATTGCACAATA
 T C G A A C G T G T C A A T C G A G T C G A T C C A T G C G T A G T C A G T A C A C G T
T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

NRL/MA0842.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--ATAGCCGAAC
AATTTGCTGAC-
 A C G T A C G T T C G A A C G T G T C A A T C G A G T C G A T C C A T G C G T A G T C A G T A C
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T

POL001.1_MTE/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---ATAGCCGAAC------
TTTCGAGCGGAACGGTCGC
 A C G T A C G T A C G T T C G A A C G T G T C A A T C G A G T C G A T C C A T G C G T A G T C A G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T A G C T A G T C C T A G C G T A C T A G A G T C A T C G T A C G C G T A C T A G A G T C A C T G A T C G C G A T G A T C T A C G A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-ATAGCCGAAC-
ACTAGCCAATCA
 A C G T T C G A A C G T G T C A A T C G A G T C G A T C C A T G C G T A G T C A G T A C A C G T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A