Information for 12-CTCAGTTCCGGGAGCT (Motif 16)

A T G C A G C T A T G C C T G A T C A G G A C T A C G T A G T C G A T C T A C G A C T G C T A G G T C A A C T G A G T C A G C T
Reverse Opposite:
C T G A C T A G A G T C A C G T A G T C A G T C A G T C C A T G C T A G G T C A C T G A A G T C A G C T T A C G C T G A T A C G
p-value:1e-13
log p-value:-3.058e+01
Information Content per bp:1.723
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets32.2 +/- 20.2bp
Average Position of motif in Background42.7 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.61
Offset:9
Orientation:reverse strand
Alignment:CTCAGTTCCGGGAGCT
---------CGGAGC-
 A T G C A G C T A T G C C T G A T C A G G A C T A C G T A G T C G A T C T A C G A C T G C T A G G T C A A C T G A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.56
Offset:9
Orientation:reverse strand
Alignment:CTCAGTTCCGGGAGCT
---------NGAAGC-
 A T G C A G C T A T G C C T G A T C A G G A C T A C G T A G T C G A T C T A C G A C T G C T A G G T C A A C T G A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T

Gabpa/MA0062.2/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTCAGTTCCGGGAGCT
NCCACTTCCGG-----
 A T G C A G C T A T G C C T G A T C A G G A C T A C G T A G T C G A T C T A C G A C T G C T A G G T C A A C T G A G T C A G C T
A C T G A G T C A G T C C T G A A G T C C A G T A C G T A G T C G T A C A C T G A T C G A C G T A C G T A C G T A C G T A C G T

PB0011.1_Ehf_1/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTCAGTTCCGGGAGCT
-TNACTTCCGGNTNNN
 A T G C A G C T A T G C C T G A T C A G G A C T A C G T A G T C G A T C T A C G A C T G C T A G G T C A A C T G A G T C A G C T
A C G T A G C T G C A T C T G A A G T C C G A T C G A T G T A C A G T C A C T G A T C G T C A G C G A T G T A C T G A C A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CTCAGTTCCGGGAGCT
----CTTCCNGGAA--
 A T G C A G C T A T G C C T G A T C A G G A C T A C G T A G T C G A T C T A C G A C T G C T A G G T C A A C T G A G T C A G C T
A C G T A C G T A C G T A C G T A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T A C G T

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CTCAGTTCCGGGAGCT
-----ANCCGGAAGT-
 A T G C A G C T A T G C C T G A T C A G G A C T A C G T A G T C G A T C T A C G A C T G C T A G G T C A A C T G A G T C A G C T
A C G T A C G T A C G T A C G T A C G T C T G A T G C A T A G C T G A C T A C G T C A G C T G A G C T A T C A G G A C T A C G T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CTCAGTTCCGGGAGCT
--NRYTTCCGGY----
 A T G C A G C T A T G C C T G A T C A G G A C T A C G T A G T C G A T C T A C G A C T G C T A G G T C A A C T G A G T C A G C T
A C G T A C G T G A T C C T G A A G T C C G A T C G A T G A T C A G T C A C T G A T C G A G C T A C G T A C G T A C G T A C G T

ELK4/MA0076.2/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CTCAGTTCCGGGAGCT
-CCACTTCCGGC----
 A T G C A G C T A T G C C T G A T C A G G A C T A C G T A G T C G A T C T A C G A C T G C T A G G T C A A C T G A G T C A G C T
A C G T A T G C A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C T G A T C G A G T C A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CTCAGTTCCGGGAGCT
---ACATCCTGNT---
 A T G C A G C T A T G C C T G A T C A G G A C T A C G T A G T C G A T C T A C G A C T G C T A G G T C A A C T G A G T C A G C T
A C G T A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T A C G T

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CTCAGTTCCGGGAGCT
--HACTTCCGGY----
 A T G C A G C T A T G C C T G A T C A G G A C T A C G T A G T C G A T C T A C G A C T G C T A G G T C A A C T G A G T C A G C T
A C G T A C G T G A T C T C G A A G T C C G A T C G A T A G T C A T G C A C T G A T C G G A C T A C G T A C G T A C G T A C G T