Information for 11-SMMRGACGGAAMGRGG (Motif 13)

A T C G G T A C G T A C C T A G A C T G C G T A A G T C C T A G C T A G C T G A G T C A G T A C A C T G C T A G A C T G A C T G
Reverse Opposite:
G T A C A G T C A G T C A G T C A C T G A C G T A G C T A G T C A G T C A C T G A C G T A G T C A G T C A C T G A C T G T A G C
p-value:1e-13
log p-value:-3.190e+01
Information Content per bp:1.778
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.4 +/- 31.4bp
Average Position of motif in Background76.1 +/- 1.8bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:SMMRGACGGAAMGRGG
-CCAGACAG-------
 A T C G G T A C G T A C C T A G A C T G C G T A A G T C C T A G C T A G C T G A G T C A G T A C A C T G C T A G A C T G A C T G
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:SMMRGACGGAAMGRGG
-CCAGACRSVB-----
 A T C G G T A C G T A C C T A G A C T G C G T A A G T C C T A G C T A G C T G A G T C A G T A C A C T G C T A G A C T G A C T G
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T A C G T

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:3
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-SMMRGACGGAAMGRGG-
GGAAGGAAGGAAGGAAGG
 A C G T A T C G G T A C G T A C C T A G A C T G C G T A A G T C C T A G C T A G C T G A G T C A G T A C A C T G C T A G A C T G A C T G A C G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----SMMRGACGGAAMGRGG
CAAATCCAGACATCACA---
 A C G T A C G T A C G T A C G T A T C G G T A C G T A C C T A G A C T G C G T A A G T C C T A G C T A G C T G A G T C A G T A C A C T G C T A G A C T G A C T G
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.51
Offset:0
Orientation:forward strand
Alignment:SMMRGACGGAAMGRGG----
SMCAGTCWGAKGGAGGAGGC
 A T C G G T A C G T A C C T A G A C T G C G T A A G T C C T A G C T A G C T G A G T C A G T A C A C T G C T A G A C T G A C T G A C G T A C G T A C G T A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

PB0124.1_Gabpa_2/Jaspar

Match Rank:6
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:SMMRGACGGAAMGRGG
NNNNGGGGGAAGANGG
 A T C G G T A C G T A C C T A G A C T G C G T A A G T C C T A G C T A G C T G A G T C A G T A C A C T G C T A G A C T G A C T G
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G

PB0151.1_Myf6_2/Jaspar

Match Rank:7
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---SMMRGACGGAAMGRGG
AGCAACAGCCGCACC----
 A C G T A C G T A C G T A T C G G T A C G T A C C T A G A C T G C G T A A G T C C T A G C T A G C T G A G T C A G T A C A C T G C T A G A C T G A C T G
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T A C G T A C G T A C G T

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:SMMRGACGGAAMGRGG
----RCCGGAAGTD--
 A T C G G T A C G T A C C T A G A C T G C G T A A G T C C T A G C T A G C T G A G T C A G T A C A C T G C T A G A C T G A C T G
A C G T A C G T A C G T A C G T C T G A T A G C T G A C T A C G T C A G G C T A G C T A T C A G A G C T C T A G A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.47
Offset:4
Orientation:reverse strand
Alignment:SMMRGACGGAAMGRGG
----NNTGGAAANN--
 A T C G G T A C G T A C C T A G A C T G C G T A A G T C C T A G C T A G C T G A G T C A G T A C A C T G C T A G A C T G A C T G
A C G T A C G T A C G T A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.47
Offset:4
Orientation:reverse strand
Alignment:SMMRGACGGAAMGRGG
----DCCGGAARYN--
 A T C G G T A C G T A C C T A G A C T G C G T A A G T C C T A G C T A G C T G A G T C A G T A C A C T G C T A G A C T G A C T G
A C G T A C G T A C G T A C G T C T G A T A G C T G A C T A C G C T A G G T C A G C T A T C A G G A C T T C A G A C G T A C G T