Information for 1-AACATGGCGGCBGCSR (Motif 1)

C T G A G C T A A T G C C G T A A C G T A C T G A C T G G T A C A T C G T A C G G A T C A C G T A T C G A G T C T A G C C T G A
Reverse Opposite:
G A C T A T C G T C A G T A G C T G C A C A T G A T G C T A G C A C T G A G T C A G T C C G T A A C G T T A C G C G A T A G C T
p-value:1e-160
log p-value:-3.705e+02
Information Content per bp:1.602
Number of Target Sequences with motif236.0
Percentage of Target Sequences with motif24.97%
Number of Background Sequences with motif320.3
Percentage of Background Sequences with motif2.39%
Average Position of motif in Targets53.3 +/- 19.4bp
Average Position of motif in Background53.4 +/- 36.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-AACATGGCGGCBGCSR
CAAGATGGCGGC-----
 A C G T C T G A G C T A A T G C C G T A A C G T A C T G A C T G G T A C A T C G T A C G G A T C A C G T A T C G A G T C T A G C C T G A
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-AACATGGCGGCBGCSR
CAAGATGGCGGC-----
 A C G T C T G A G C T A A T G C C G T A A C G T A C T G A C T G G T A C A T C G T A C G G A T C A C G T A T C G A G T C T A G C C T G A
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T A C G T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:AACATGGCGGCBGCSR
-TAATGGCGGNC----
 C T G A G C T A A T G C C G T A A C G T A C T G A C T G G T A C A T C G T A C G G A T C A C G T A T C G A G T C T A G C C T G A
A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:AACATGGCGGCBGCSR
---TTGGCA-------
 C T G A G C T A A T G C C G T A A C G T A C T G A C T G G T A C A T C G T A C G G A T C A C G T A T C G A G T C T A G C C T G A
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AACATGGCGGCBGCSR
NNNNTTGGCGCCGANNN
 A C G T C T G A G C T A A T G C C G T A A C G T A C T G A C T G G T A C A T C G T A C G G A T C A C G T A T C G A G T C T A G C C T G A
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AACATGGCGGCBGCSR
--NTTGGCANN-----
 C T G A G C T A A T G C C G T A A C G T A C T G A C T G G T A C A T C G T A C G G A T C A C G T A T C G A G T C T A G C C T G A
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AACATGGCGGCBGCSR
TTGCCATGGCAACN----
 A C G T A C G T C T G A G C T A A T G C C G T A A C G T A C T G A C T G G T A C A T C G T A C G G A T C A C G T A T C G A G T C T A G C C T G A
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AACATGGCGGCBGCSR
NAGANTGGCGGGGNGNA
 A C G T C T G A G C T A A T G C C G T A A C G T A C T G A C T G G T A C A T C G T A C G G A T C A C G T A T C G A G T C T A G C C T G A
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

PB0113.1_E2F3_2/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AACATGGCGGCBGCSR
NNNNTTGGCGCCGANNN
 A C G T C T G A G C T A A T G C C G T A A C G T A C T G A C T G G T A C A T C G T A C G G A T C A C G T A T C G A G T C T A G C C T G A
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AACATGGCGGCBGCSR
--CATGAC--------
 C T G A G C T A A T G C C G T A A C G T A C T G A C T G G T A C A T C G T A C G G A T C A C G T A T C G A G T C T A G C C T G A
A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T