Information for 20-WGGRATAKTGTGR (Motif 27)

C G A T A C T G A C T G C T G A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G C T G A
Reverse Opposite:
A G C T A G T C C G T A A G T C C G T A T G A C A C G T C G T A A C G T A G C T A G T C A G T C G C T A
p-value:1e-5
log p-value:-1.325e+01
Information Content per bp:1.874
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.8 +/- 21.7bp
Average Position of motif in Background14.1 +/- 0.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:WGGRATAKTGTGR
---CTCATTGTC-
 C G A T A C T G A C T G C T G A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G C T G A
A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:WGGRATAKTGTGR--
-CTAATATTGCTAAA
 C G A T A C T G A C T G C T G A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G C T G A A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:WGGRATAKTGTGR--
-CTAATATTGCTAAA
 C G A T A C T G A C T G C T G A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G C T G A A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--WGGRATAKTGTGR
NCTGGAATGC-----
 A C G T A C G T C G A T A C T G A C T G C T G A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G C T G A
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:WGGRATAKTGTGR----
-----NNHTGTGGTTWN
 C G A T A C T G A C T G C T G A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:WGGRATAKTGTGR-
----ATGGGGTGAT
 C G A T A C T G A C T G C T G A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G C T G A A C G T
A C G T A C G T A C G T A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--WGGRATAKTGTGR
CCWGGAATGY-----
 A C G T A C G T C G A T A C T G A C T G C T G A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G C T G A
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:WGGRATAKTGTGR
TGGAAAA------
 C G A T A C T G A C T G C T G A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G C T G A
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:WGGRATAKTGTGR
TGGAATGT-----
 C G A T A C T G A C T G C T G A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G C T G A
G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T A C G T A C G T A C G T A C G T

NR3C2/MA0727.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:WGGRATAKTGTGR----
GGGAACATTGTGTTCCC
 C G A T A C T G A C T G C T G A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G C T G A A C G T A C G T A C G T A C G T
C A T G T C A G C T A G C G T A C T G A A T G C C T G A G A C T G C A T C T A G G A C T A T C G A C G T G C A T G T A C G A T C G T A C