Information for 1-DCVCTAVACCACHATG (Motif 1)

C A T G A G T C T A C G A G T C A G C T T C G A T G A C G T C A A T G C A G T C C T G A G T A C G T C A C T G A C G A T A T C G
Reverse Opposite:
T A G C C G T A A G C T C A G T A C T G A G C T C T A G A T C G A C G T A C T G A C G T C T G A C T A G A T G C C T A G G T A C
p-value:1e-16
log p-value:-3.724e+01
Information Content per bp:1.696
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif9.84%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets71.7 +/- 16.7bp
Average Position of motif in Background41.5 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX3/MA0684.1/Jaspar

Match Rank:1
Score:0.56
Offset:5
Orientation:forward strand
Alignment:DCVCTAVACCACHATG
-----AAACCGCAAA-
 C A T G A G T C T A C G A G T C A G C T T C G A T G A C G T C A A T G C A G T C C T G A G T A C G T C A C T G A C G A T A T C G
A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:2
Score:0.55
Offset:5
Orientation:forward strand
Alignment:DCVCTAVACCACHATG
-----AAACCGCAA--
 C A T G A G T C T A C G A G T C A G C T T C G A T G A C G T C A A T G C A G T C C T G A G T A C G T C A C T G A C G A T A T C G
A C G T A C G T A C G T A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:3
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--DCVCTAVACCACHATG
TCNNTTTACAGCGNNNT-
 A C G T A C G T C A T G A G T C T A C G A G T C A G C T T C G A T G A C G T C A A T G C A G T C C T G A G T A C G T C A C T G A C G A T A T C G
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T A C G T

PH0157.1_Rhox11_1/Jaspar

Match Rank:4
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--DCVCTAVACCACHATG
TCNNTTTACAGCGNNNT-
 A C G T A C G T C A T G A G T C T A C G A G T C A G C T T C G A T G A C G T C A A T G C A G T C C T G A G T A C G T C A C T G A C G A T A T C G
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.51
Offset:5
Orientation:forward strand
Alignment:DCVCTAVACCACHATG
-----AAACCACANN-
 C A T G A G T C T A C G A G T C A G C T T C G A T G A C G T C A A T G C A G T C C T G A G T A C G T C A C T G A C G A T A T C G
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.51
Offset:4
Orientation:forward strand
Alignment:DCVCTAVACCACHATG
----NAAACCACAG--
 C A T G A G T C T A C G A G T C A G C T T C G A T G A C G T C A A T G C A G T C C T G A G T A C G T C A C T G A C G A T A T C G
A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:7
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--DCVCTAVACCACHATG
TCNCTTTACAGCGNNNT-
 A C G T A C G T C A T G A G T C T A C G A G T C A G C T T C G A T G A C G T C A A T G C A G T C C T G A G T A C G T C A C T G A C G A T A T C G
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:8
Score:0.50
Offset:9
Orientation:reverse strand
Alignment:DCVCTAVACCACHATG--
---------GACAATGNN
 C A T G A G T C T A C G A G T C A G C T T C G A T G A C G T C A A T G C A G T C C T G A G T A C G T C A C T G A C G A T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

PB0194.1_Zbtb12_2/Jaspar

Match Rank:9
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--DCVCTAVACCACHATG
TATCATTAGAACGCT---
 A C G T A C G T C A T G A G T C T A C G A G T C A G C T T C G A T G A C G T C A A T G C A G T C C T G A G T A C G T C A C T G A C G A T A T C G
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T A C G T A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:10
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-DCVCTAVACCACHATG
NGYCATAAAWCH-----
 A C G T C A T G A G T C T A C G A G T C A G C T T C G A T G A C G T C A A T G C A G T C C T G A G T A C G T C A C T G A C G A T A T C G
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T A C G T A C G T A C G T A C G T