Information for 11-GCTTGGCTTA (Motif 52)

C T A G G A T C G A C T C G A T C A T G A T C G A G T C G C A T C G A T C G T A
Reverse Opposite:
G C A T G C T A C G T A T C A G T A G C G T A C G C T A C T G A C T A G G A T C
p-value:1e-5
log p-value:-1.327e+01
Information Content per bp:1.650
Number of Target Sequences with motif83.0
Percentage of Target Sequences with motif10.31%
Number of Background Sequences with motif3022.4
Percentage of Background Sequences with motif6.01%
Average Position of motif in Targets49.2 +/- 26.5bp
Average Position of motif in Background50.7 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GCTTGGCTTA
--TTGGCA--
 C T A G G A T C G A C T C G A T C A T G A T C G A G T C G C A T C G A T C G T A
A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GCTTGGCTTA
-NTTGGCANN
 C T A G G A T C G A C T C G A T C A T G A T C G A G T C G C A T C G A T C G T A
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCTTGGCTTA
NNACTTGCCTT-
 A C G T A C G T C T A G G A T C G A C T C G A T C A T G A T C G A G T C G C A T C G A T C G T A
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCTTGGCTTA-
TGATTGGCTANN
 A C G T C T A G G A T C G A C T C G A T C A T G A T C G A G T C G C A T C G A T C G T A A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

Nr2e1/MA0676.1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GCTTGGCTTA-
--TTGACTTTT
 C T A G G A T C G A C T C G A T C A T G A T C G A G T C G C A T C G A T C G T A A C G T
A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCTTGGCTTA
NNTTGGCANN
 C T A G G A T C G A C T C G A T C A T G A T C G A G T C G C A T C G A T C G T A
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NFY(CCAAT)/Promoter/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCTTGGCTTA
CCGATTGGCT--
 A C G T A C G T C T A G G A T C G A C T C G A T C A T G A T C G A G T C G C A T C G A T C G T A
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GCTTGGCTTA--
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A C G T C T A G G A T C G A C T C G A T C A T G A T C G A G T C G C A T C G A T C G T A A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GCTTGGCTTA--
NWTGATTRGRTTAWN
 A C G T A C G T A C G T C T A G G A T C G A C T C G A T C A T G A T C G A G T C G C A T C G A T C G T A A C G T A C G T
C G T A G C A T C G A T C T A G C G T A A C G T A C G T C T G A T C A G C T A G A C G T A C G T G C T A C G T A G T A C

RHOXF1/MA0719.1/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GCTTGGCTTA-
---NGGATTAN
 C T A G G A T C G A C T C G A T C A T G A T C G A G T C G C A T C G A T C G T A A C G T
A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T