Information for 10-TGGCAGTACG (Motif 51)

A C G T A C T G A C T G A G T C G T C A A C T G C G A T C G T A T G A C A C T G
Reverse Opposite:
G T A C A C T G A C G T C G T A A G T C C A G T A C T G G T A C A G T C G T C A
p-value:1e-6
log p-value:-1.409e+01
Information Content per bp:1.782
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif10.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.2 +/- 15.9bp
Average Position of motif in Background69.2 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myb/MA0100.2/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TGGCAGTACG
TGGCAGTTGN
 A C G T A C T G A C T G A G T C G T C A A C T G C G A T C G T A T G A C A C T G
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

PB0149.1_Myb_2/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TGGCAGTACG---
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C G T C A A C T G C G A T C G T A T G A C A C T G A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAGTACG
CTTGGCAA----
 A C G T A C G T A C G T A C T G A C T G A G T C G T C A A C T G C G A T C G T A T G A C A C T G
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGGCAGTACG
TGGCAGTTGG
 A C G T A C T G A C T G A G T C G T C A A C T G C G A T C G T A T G A C A C T G
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TGGCAGTACG
TTGGCA-----
 A C G T A C G T A C T G A C T G A G T C G T C A A C T G C G A T C G T A T G A C A C T G
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAGTACG
NTTGGCANN---
 A C G T A C G T A C G T A C T G A C T G A G T C G T C A A C T G C G A T C G T A T G A C A C T G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TGGCAGTACG
NNTTGGCANN---
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C G T C A A C T G C G A T C G T A T G A C A C T G
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TGGCAGTACG
TNNGGGCAG----
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C G T C A A C T G C G A T C G T A T G A C A C T G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGGCAGTACG
-GGCVGTTR-
 A C G T A C T G A C T G A G T C G T C A A C T G C G A T C G T A T G A C A C T G
A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TGGCAGTACG
ARNTGACA-----
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C G T C A A C T G C G A T C G T A T G A C A C T G
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T