Information for 21-AAVCAGAAACAAC (Motif 46)

G T C A C T G A T G C A A G T C G T C A A C T G G C T A C G T A C G T A A T G C C G T A T G C A G T A C
Reverse Opposite:
A C T G A C G T A C G T T A C G A C G T A C G T C G A T G T A C A C G T A C T G A C G T A G C T C A G T
p-value:1e-6
log p-value:-1.507e+01
Information Content per bp:1.811
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.37%
Number of Background Sequences with motif88.2
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets39.3 +/- 24.6bp
Average Position of motif in Background51.8 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXF2/MA0030.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AAVCAGAAACAAC
CAAACGTAAACAAT
 A C G T G T C A C T G A T G C A A G T C G T C A A C T G G C T A C G T A C G T A A T G C C G T A T G C A G T A C
A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T

Foxj2/MA0614.1/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:forward strand
Alignment:AAVCAGAAACAAC
----GTAAACAA-
 G T C A C T G A T G C A A G T C G T C A A C T G G C T A C G T A C G T A A T G C C G T A T G C A G T A C
A C G T A C G T A C G T A C G T C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AAVCAGAAACAAC
GAAACTGAAACT--
 A C G T G T C A C T G A T G C A A G T C G T C A A C T G G C T A C G T A C G T A A T G C C G T A T G C A G T A C
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AAVCAGAAACAAC
GAAAMTGAAACT--
 A C G T G T C A C T G A T G C A A G T C G T C A A C T G G C T A C G T A C G T A A T G C C G T A T G C A G T A C
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T A C G T

IRF8/MA0652.1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AAVCAGAAACAAC
TCGAAACCGAAACT--
 A C G T A C G T A C G T G T C A C T G A T G C A A G T C G T C A A C T G G C T A C G T A C G T A A T G C C G T A T G C A G T A C
G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T A C G T A C G T

ETV2/MA0762.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAVCAGAAACAAC
AACCGGAAATA--
 G T C A C T G A T G C A A G T C G T C A A C T G G C T A C G T A C G T A A T G C C G T A T G C A G T A C
C T G A T C G A T A G C T G A C A C T G A C T G C G T A G C T A T C G A A G C T C T G A A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AAVCAGAAACAAC
--AAATAAACA--
 G T C A C T G A T G C A A G T C G T C A A C T G G C T A C G T A C G T A A T G C C G T A T G C A G T A C
A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:8
Score:0.62
Offset:4
Orientation:forward strand
Alignment:AAVCAGAAACAAC
----GTAAACAA-
 G T C A C T G A T G C A A G T C G T C A A C T G G C T A C G T A C G T A A T G C C G T A T G C A G T A C
A C G T A C G T A C G T A C G T C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAVCAGAAACAAC
WWATRTAAACAN-
 G T C A C T G A T G C A A G T C G T C A A C T G G C T A C G T A C G T A A T G C C G T A T G C A G T A C
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:10
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AAVCAGAAACAAC
----GTAAACA--
 G T C A C T G A T G C A A G T C G T C A A C T G G C T A C G T A C G T A A T G C C G T A T G C A G T A C
A C G T A C G T A C G T A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A A C G T A C G T