Information for 20-GGTTGTCCTTATT (Motif 45)

A C T G A T C G G C A T C A G T A C T G A C G T A G T C G T A C C G A T A C G T C G T A C G A T A C G T
Reverse Opposite:
T G C A G C T A A C G T G T C A C G T A A C T G C T A G T G C A T A G C G T C A C G T A T A G C T A G C
p-value:1e-7
log p-value:-1.663e+01
Information Content per bp:1.668
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.11%
Number of Background Sequences with motif203.2
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets56.8 +/- 23.6bp
Average Position of motif in Background52.1 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GGTTGTCCTTATT
-BNTGDCCTTG--
 A C T G A T C G G C A T C A G T A C T G A C G T A G T C G T A C C G A T A C G T C G T A C G A T A C G T
A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GGTTGTCCTTATT
---TGACCTYA--
 A C T G A T C G G C A T C A G T A C T G A C G T A G T C G T A C C G A T A C G T C G T A C G A T A C G T
A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GGTTGTCCTTATT
--GTGACCTT---
 A C T G A T C G G C A T C A G T A C T G A C G T A G T C G T A C C G A T A C G T C G T A C G A T A C G T
A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:4
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GGTTGTCCTTATT-
----AACCTTATAT
 A C T G A T C G G C A T C A G T A C T G A C G T A G T C G T A C C G A T A C G T C G T A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T

Esrrg/MA0643.1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GGTTGTCCTTATT
--ATGACCTTGA-
 A C T G A T C G G C A T C A G T A C T G A C G T A G T C G T A C C G A T A C G T C G T A C G A T A C G T
A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T

RORA/MA0071.1/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GGTTGTCCTTATT
---TGACCTTGAT
 A C T G A T C G G C A T C A G T A C T G A C G T A G T C G T A C C G A T A C G T C G T A C G A T A C G T
A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGTTGTCCTTATT
--NTGACCTTGA-
 A C T G A T C G G C A T C A G T A C T G A C G T A G T C G T A C C G A T A C G T C G T A C G A T A C G T
A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GGTTGTCCTTATT
---TGACCTTGAV
 A C T G A T C G G C A T C A G T A C T G A C G T A G T C G T A C C G A T A C G T C G T A C G A T A C G T
A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GGTTGTCCTTATT
---TGACCTTGAN
 A C T G A T C G G C A T C A G T A C T G A C G T A G T C G T A C C G A T A C G T C G T A C G A T A C G T
A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

PB0014.1_Esrra_1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGTTGTCCTTATT--
NNNNATGACCTTGANTN
 A C G T A C G T A C T G A T C G G C A T C A G T A C T G A C G T A G T C G T A C C G A T A C G T C G T A C G A T A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A