Information for 3-CAMTGRCCCCYRCWGM (Motif 4)

A G T C C G T A G T A C C G A T A C T G T C A G A G T C A G T C A G T C A G T C A G C T C T A G A G T C C G T A A C T G G T A C
Reverse Opposite:
A C T G G T A C C G A T A C T G A G T C C T G A A C T G A C T G A C T G A C T G A G T C A G T C C G T A A C T G A C G T A C T G
p-value:1e-14
log p-value:-3.267e+01
Information Content per bp:1.844
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.1 +/- 23.1bp
Average Position of motif in Background33.0 +/- 5.0bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0118.1_Esrra_2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CAMTGRCCCCYRCWGM
NNNNTTGACCCCTNNNN-
 A C G T A C G T A G T C C G T A G T A C C G A T A C T G T C A G A G T C A G T C A G T C A G T C A G C T C T A G A G T C C G T A A C T G G T A C
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CAMTGRCCCCYRCWGM
---TGACCYCT-----
 A G T C C G T A G T A C C G A T A C T G T C A G A G T C A G T C A G T C A G T C A G C T C T A G A G T C C G T A A C T G G T A C
A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CAMTGRCCCCYRCWGM--
---GGCCYCCTGCTGDGH
 A G T C C G T A G T A C C G A T A C T G T C A G A G T C A G T C A G T C A G T C A G C T C T A G A G T C C G T A A C T G G T A C A C G T A C G T
A C G T A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CAMTGRCCCCYRCWGM
AGGTCANTGACCTN------
 A C G T A C G T A C G T A C G T A G T C C G T A G T A C C G A T A C T G T C A G A G T C A G T C A G T C A G T C A G C T C T A G A G T C C G T A A C T G G T A C
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CAMTGRCCCCYRCWGM
NNANTTGACCCCTNNNN-
 A C G T A C G T A G T C C G T A G T A C C G A T A C T G T C A G A G T C A G T C A G T C A G T C A G C T C T A G A G T C C G T A A C T G G T A C
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CAMTGRCCCCYRCWGM--
---GACCCCCCGCTGTGC
 A G T C C G T A G T A C C G A T A C T G T C A G A G T C A G T C A G T C A G T C A G C T C T A G A G T C C G T A A C T G G T A C A C G T A C G T
A C G T A C G T A C G T A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

PB0057.1_Rxra_1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAMTGRCCCCYRCWGM
TGTCGTGACCCCTTAAT-
 A C G T A C G T A G T C C G T A G T A C C G A T A C T G T C A G A G T C A G T C A G T C A G T C A G C T C T A G A G T C C G T A A C T G G T A C
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CAMTGRCCCCYRCWGM--
---GACCCCCCGCTGCGC
 A G T C C G T A G T A C C G A T A C T G T C A G A G T C A G T C A G T C A G T C A G C T C T A G A G T C C G T A A C T G G T A C A C G T A C G T
A C G T A C G T A C G T A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAMTGRCCCCYRCWGM
ACAAAGGNBCCT-----
 A C G T A G T C C G T A G T A C C G A T A C T G T C A G A G T C A G T C A G T C A G T C A G C T C T A G A G T C C G T A A C T G G T A C
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CAMTGRCCCCYRCWGM-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A G T C C G T A G T A C C G A T A C T G T C A G A G T C A G T C A G T C A G T C A G C T C T A G A G T C C G T A A C T G G T A C A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C