Information for 14-AGGGTGGTCAAAA (Motif 38)

C G T A A C T G A C T G A C T G A G C T A C T G A C T G C G A T A G T C C G T A C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C G T A C T G C G T A A G T C G T A C C T G A A G T C A G T C G T A C A C G T
p-value:1e-8
log p-value:-1.974e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.2 +/- 21.9bp
Average Position of motif in Background26.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---AGGGTGGTCAAAA-
NNANTGGTGGTCTTNNN
 A C G T A C G T A C G T C G T A A C T G A C T G A C T G A G C T A C T G A C T G C G A T A G T C C G T A C G T A C G T A C G T A A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGGGTGGTCAAAA---
-ARGAGGMCAAAATGW
 C G T A A C T G A C T G A C T G A G C T A C T G A C T G C G A T A G T C C G T A C G T A C G T A C G T A A C G T A C G T A C G T
A C G T T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AGGGTGGTCAAAA
CGTGGGTGGTCC---
 A C G T A C G T C G T A A C T G A C T G A C T G A G C T A C T G A C T G C G A T A G T C C G T A C G T A C G T A C G T A
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGGGTGGTCAAAA
CAGTGTGGTCGC--
 A C G T C G T A A C T G A C T G A C T G A G C T A C T G A C T G C G A T A G T C C G T A C G T A C G T A C G T A
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C A C G T A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AGGGTGGTCAAAA
NTNTGGGGGGTCNNNA
 A C G T A C G T A C G T C G T A A C T G A C T G A C T G A G C T A C T G A C T G C G A T A G T C C G T A C G T A C G T A C G T A
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

HOXC12/MA0906.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGGGTGGTCAAAA
--GGTCGTAAAAA
 C G T A A C T G A C T G A C T G A G C T A C T G A C T G C G A T A G T C C G T A C G T A C G T A C G T A
A C G T A C G T C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A

PH0067.1_Hoxc12/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGGGTGGTCAAAA---
TTAGGTCGTAAAATTTC
 A C G T C G T A A C T G A C T G A C T G A G C T A C T G A C T G C G A T A G T C C G T A C G T A C G T A C G T A A C G T A C G T A C G T
G A C T G C A T T C G A T C A G T C A G A G C T G T A C C T A G A C G T G C T A C G T A G C T A G C T A G C A T A G C T C G A T G A T C

Rarg/MA0859.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AGGGTGGTCAAAA------
---AAGGTCAAAAGGTCAA
 C G T A A C T G A C T G A C T G A G C T A C T G A C T G C G A T A G T C C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

HOXC11/MA0651.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGGGTGGTCAAAA
--GGTCGTAAAAT
 C G T A A C T G A C T G A C T G A G C T A C T G A C T G C G A T A G T C C G T A C G T A C G T A C G T A
A C G T A C G T C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T

HOXD12/MA0873.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGGGTGGTCAAAA
--AGTCGTAAAAA
 C G T A A C T G A C T G A C T G A G C T A C T G A C T G C G A T A G T C C G T A C G T A C G T A C G T A
A C G T A C G T T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A