Information for 17-MTGCTKTATTWCTGAA (Motif 29)

G T C A A C G T A C T G G A T C C G A T A C T G A C G T G T C A A C G T G A C T C G T A G T A C A C G T A C T G C G T A C G T A
Reverse Opposite:
C G A T A C G T G T A C C G T A C A T G C G A T C T G A C G T A A C G T C G T A G T A C C G T A C A T G A G T C G T C A A C G T
p-value:1e-9
log p-value:-2.203e+01
Information Content per bp:1.782
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 25.5bp
Average Position of motif in Background26.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0150.1_Pou4f3/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:MTGCTKTATTWCTGAA---
---AGTTATTAATGAGGTC
 G T C A A C G T A C T G G A T C C G A T A C T G A C G T G T C A A C G T G A C T C G T A G T A C A C G T A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T C A G C A G T G C A T C G T A G A C T C G A T C G T A C G T A G A C T C A T G G T C A C T A G A C T G G A C T G A T C

POU4F3/MA0791.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:MTGCTKTATTWCTGAA
ATGCATAATTAATGAG
 G T C A A C G T A C T G G A T C C G A T A C T G A C G T G T C A A C G T G A C T C G T A G T A C A C G T A C T G C G T A C G T A
C T G A A G C T C A T G G T A C G C T A C G A T C G T A C G T A C G A T C G A T C G T A C T G A G A C T C A T G G T C A T C A G

POU4F2/MA0683.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:MTGCTKTATTWCTGAA
ATGCATAATTAATGAG
 G T C A A C G T A C T G G A T C C G A T A C T G A C G T G T C A A C G T G A C T C G T A G T A C A C G T A C T G C G T A C G T A
C T G A G A C T C T A G G T A C G C T A C G A T C G T A G C T A G C A T G C A T C T G A T C G A A C G T A C T G C T G A T C A G

PB0129.1_Glis2_2/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:MTGCTKTATTWCTGAA--
----AATATTAATAAAGA
 G T C A A C G T A C T G G A T C C G A T A C T G A C G T G T C A A C G T G A C T C G T A G T A C A C G T A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:MTGCTKTATTWCTGAA
ATGAATWATTCATGA-
 G T C A A C G T A C T G G A T C C G A T A C T G A C G T G T C A A C G T G A C T C G T A G T A C A C G T A C T G C G T A C G T A
G T C A A C G T C T A G G T C A C G T A G C A T C G T A C G T A G C A T C A G T A G T C C G T A C A G T C T A G C T G A A C G T

POU4F1/MA0790.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:MTGCTKTATTWCTGAA
ATGAATAATTAATG--
 G T C A A C G T A C T G G A T C C G A T A C T G A C G T G T C A A C G T G A C T C G T A G T A C A C G T A C T G C G T A C G T A
T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:MTGCTKTATTWCTGAA----
----ACTATGAATGAATGAT
 G T C A A C G T A C T G G A T C C G A T A C T G A C G T G T C A A C G T G A C T C G T A G T A C A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:8
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:MTGCTKTATTWCTGAA
--NTTTTATGAC----
 G T C A A C G T A C T G G A T C C G A T A C T G A C G T G T C A A C G T G A C T C G T A G T A C A C G T A C T G C G T A C G T A
A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T A C G T A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:MTGCTKTATTWCTGAA--
---CTTTCANTATGACTV
 G T C A A C G T A C T G G A T C C G A T A C T G A C G T G T C A A C G T G A C T C G T A G T A C A C G T A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

CDX2/MA0465.1/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:MTGCTKTATTWCTGAA
---TTTTATGGCTN--
 G T C A A C G T A C T G G A T C C G A T A C T G A C G T G T C A A C G T G A C T C G T A G T A C A C G T A C T G C G T A C G T A
A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T A C G T A C G T