Information for 9-AGCCAGCCAGACG (Motif 25)

C G T A A C T G A G T C A G T C G T C A C A T G A G T C A G T C C G T A A C T G C G T A A G T C A C T G
Reverse Opposite:
A G T C C T A G A C G T A G T C A C G T C T A G A C T G G A T C A C G T A C T G A C T G A G T C A C G T
p-value:1e-9
log p-value:-2.203e+01
Information Content per bp:1.930
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.4 +/- 24.8bp
Average Position of motif in Background45.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:AGCCAGCCAGACG---
------CCAGACRSVB
 C G T A A C T G A G T C A G T C G T C A C A T G A G T C A G T C C G T A A C T G C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:AGCCAGCCAGACG
---ATGCCAGACN
 C G T A A C T G A G T C A G T C G T C A C A T G A G T C A G T C C G T A A C T G C G T A A G T C A C T G
A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:AGCCAGCCAGACG-
------CCAGACAG
 C G T A A C T G A G T C A G T C G T C A C A T G A G T C A G T C C G T A A C T G C G T A A G T C A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

ZBTB18/MA0698.1/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGCCAGCCAGACG---
---CATCCAGATGTTC
 C G T A A C T G A G T C A G T C G T C A C A T G A G T C A G T C C G T A A C T G C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G T A C C G T A A C G T T G A C G T A C C G T A A T C G G T C A A C G T C T A G G A C T C A G T A G T C

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGCCAGCCAGACG-----
-CAAATCCAGACATCACA
 C G T A A C T G A G T C A G T C G T C A C A T G A G T C A G T C C G T A A C T G C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AGCCAGCCAGACG
TGGCAGNCTGCCAG---
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G T C G T C A C A T G A G T C A G T C C G T A A C T G C G T A A G T C A C T G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T A C G T A C G T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AGCCAGCCAGACG--
-----TCCAGATGTT
 C G T A A C T G A G T C A G T C G T C A C A T G A G T C A G T C C G T A A C T G C G T A A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AGCCAGCCAGACG------
--AAGGCCAGATGGTCCGG
 C G T A A C T G A G T C A G T C G T C A C A T G A G T C A G T C C G T A A C T G C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGCCAGCCAGACG
AGCGCGCC-----
 C G T A A C T G A G T C A G T C G T C A C A T G A G T C A G T C C G T A A C T G C G T A A G T C A C T G
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----AGCCAGCCAGACG
ACTATGCCAACCTACC-
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G T C G T C A C A T G A G T C A G T C C G T A A C T G C G T A A G T C A C T G
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C A C G T