Information for 3-TGGGCAGGTC (Motif 19)

A C G T C T A G C T A G T C A G G T A C G T C A A C T G T C A G C A G T T G A C
Reverse Opposite:
A C T G G T C A A G T C G T A C A C G T A C T G A G T C A G T C G A T C G T C A
p-value:1e-10
log p-value:-2.448e+01
Information Content per bp:1.820
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif4.72%
Number of Background Sequences with motif651.7
Percentage of Background Sequences with motif1.30%
Average Position of motif in Targets49.1 +/- 23.2bp
Average Position of motif in Background48.9 +/- 34.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TGGGCAGGTC---
-SDGCAGGTGCNS
 A C G T C T A G C T A G T C A G G T A C G T C A A C T G T C A G C A G T T G A C A C G T A C G T A C G T
A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGGGCAGGTC
TNNGGGCAG---
 A C G T A C G T A C G T C T A G C T A G T C A G G T A C G T C A A C T G T C A G C A G T T G A C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGGGCAGGTC
NGTGGGCAT---
 A C G T A C G T A C G T C T A G C T A G T C A G G T A C G T C A A C T G T C A G C A G T T G A C
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TGGGCAGGTC
WDNCTGGGCA----
 A C G T A C G T A C G T A C G T A C G T C T A G C T A G T C A G G T A C G T C A A C T G T C A G C A G T T G A C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----TGGGCAGGTC-
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T A G T C A G G T A C G T C A A C T G T C A G C A G T T G A C A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

SNAI2/MA0745.1/Jaspar

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TGGGCAGGTC-
--AACAGGTGT
 A C G T C T A G C T A G T C A G G T A C G T C A A C T G T C A G C A G T T G A C A C G T
A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

PH0140.1_Pknox1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TGGGCAGGTC---
GGATTGACAGGTCNTT
 A C G T A C G T A C G T A C G T C T A G C T A G T C A G G T A C G T C A A C T G T C A G C A G T T G A C A C G T A C G T A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGGGCAGGTC--
AGGGGGCGGGGCTG
 A C G T A C G T A C G T C T A G C T A G T C A G G T A C G T C A A C T G T C A G C A G T T G A C A C G T A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

PH0104.1_Meis2/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TGGGCAGGTC---
NTATTGACAGGTNNTN
 A C G T A C G T A C G T A C G T C T A G C T A G T C A G G T A C G T C A A C T G T C A G C A G T T G A C A C G T A C G T A C G T
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

Sp1(Zf)/Promoter/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGGGCAGGTC-
GGGGGCGGGGCC
 A C G T A C G T C T A G C T A G T C A G G T A C G T C A A C T G T C A G C A G T T G A C A C G T
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C