Information for 6-AGTAMAARCAACWCAA (Motif 9)

C G T A C T A G C G A T C G T A G T C A C G T A C G T A C T G A A G T C C G T A C G T A A T G C C G A T G T A C C G T A C G T A
Reverse Opposite:
G C A T A C G T A C T G C G T A A T C G C G A T C G A T A C T G A G C T G A C T C G A T A C G T A C G T C G T A A G T C A C G T
p-value:1e-9
log p-value:-2.236e+01
Information Content per bp:1.741
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.70%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.6 +/- 26.8bp
Average Position of motif in Background40.3 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:1
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AGTAMAARCAACWCAA
GGAAANTGAAACTNA-
 C G T A C T A G C G A T C G T A G T C A C G T A C G T A C T G A A G T C C G T A C G T A A T G C C G A T G T A C C G T A C G T A
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:2
Score:0.51
Offset:3
Orientation:forward strand
Alignment:AGTAMAARCAACWCAA--
---ATAAACAATTAAACA
 C G T A C T A G C G A T C G T A G T C A C G T A C G T A C T G A A G T C C G T A C G T A A T G C C G A T G T A C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

PH0006.1_Barhl2/Jaspar

Match Rank:3
Score:0.50
Offset:2
Orientation:forward strand
Alignment:AGTAMAARCAACWCAA--
--AAAAACCAATTAAGAA
 C G T A C T A G C G A T C G T A G T C A C G T A C G T A C T G A A G T C C G T A C G T A A T G C C G A T G T A C C G T A C G T A A C G T A C G T
A C G T A C G T G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

PB0123.1_Foxl1_2/Jaspar

Match Rank:4
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-AGTAMAARCAACWCAA
ATATCAAAACAAAACA-
 A C G T C G T A C T A G C G A T C G T A G T C A C G T A C G T A C T G A A G T C C G T A C G T A A T G C C G A T G T A C C G T A C G T A
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:5
Score:0.50
Offset:1
Orientation:forward strand
Alignment:AGTAMAARCAACWCAA
-CAAACAACAACACCT
 C G T A C T A G C G A T C G T A G T C A C G T A C G T A C T G A A G T C C G T A C G T A A T G C C G A T G T A C C G T A C G T A
A C G T G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

Hmx2/MA0897.1/Jaspar

Match Rank:6
Score:0.50
Offset:3
Orientation:forward strand
Alignment:AGTAMAARCAACWCAA----
---ACAAGCAATTAAAGAAT
 C G T A C T A G C G A T C G T A G T C A C G T A C G T A C T G A A G T C C G T A C G T A A T G C C G A T G T A C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

PH0042.1_Hmx2/Jaspar

Match Rank:7
Score:0.50
Offset:3
Orientation:forward strand
Alignment:AGTAMAARCAACWCAA----
---ACAAGCAATTAAAGAAT
 C G T A C T A G C G A T C G T A G T C A C G T A C G T A C T G A A G T C C G T A C G T A A T G C C G A T G T A C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

FOXP1/MA0481.1/Jaspar

Match Rank:8
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----AGTAMAARCAACWCAA
CAAAAGTAAACAAAG-----
 A C G T A C G T A C G T A C G T C G T A C T A G C G A T C G T A G T C A C G T A C G T A C T G A A G T C C G T A C G T A A T G C C G A T G T A C C G T A C G T A
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T A C G T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:9
Score:0.49
Offset:2
Orientation:forward strand
Alignment:AGTAMAARCAACWCAA-
--AACAAACAACAAGAG
 C G T A C T A G C G A T C G T A G T C A C G T A C G T A C T G A A G T C C G T A C G T A A T G C C G A T G T A C C G T A C G T A A C G T
A C G T A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

Hmx3/MA0898.1/Jaspar

Match Rank:10
Score:0.49
Offset:3
Orientation:forward strand
Alignment:AGTAMAARCAACWCAA----
---ACAAGCAATTAAAGAAT
 C G T A C T A G C G A T C G T A G T C A C G T A C G T A C T G A A G T C C G T A C G T A A T G C C G A T G T A C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T