Information for 3-CGKCTTYYSCCCTCAM (Motif 5)

A G T C T C A G C A G T A G T C A C G T A G C T A G C T A G T C T A G C A G T C A G T C G A T C A G C T A G T C G T C A G T A C
Reverse Opposite:
C A T G A C G T A C T G C T G A C T A G C T A G A C T G A T C G C T A G C T G A C T G A C G T A A C T G G T C A A G T C C T A G
p-value:1e-10
log p-value:-2.491e+01
Information Content per bp:1.850
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.70%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.0 +/- 18.1bp
Average Position of motif in Background43.1 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:1
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CGKCTTYYSCCCTCAM
-----TTCCCCCTAC-
 A G T C T C A G C A G T A G T C A C G T A G C T A G C T A G T C T A G C A G T C A G T C G A T C A G C T A G T C G T C A G T A C
A C G T A C G T A C G T A C G T A C G T A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGKCTTYYSCCCTCAM
CCGTCTTCCCCCTCAC-
 A C G T A G T C T C A G C A G T A G T C A C G T A G C T A G C T A G T C T A G C A G T C A G T C G A T C A G C T A G T C G T C A G T A C
T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C A C G T

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CGKCTTYYSCCCTCAM
------CTGCCCGCA-
 A G T C T C A G C A G T A G T C A C G T A G C T A G C T A G T C T A G C A G T C A G T C G A T C A G C T A G T C G T C A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CGKCTTYYSCCCTCAM------
--GCCTCCTCCMTCWGACTGKS
 A G T C T C A G C A G T A G T C A C G T A G C T A G C T A G T C T A G C A G T C A G T C G A T C A G C T A G T C G T C A G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

ZNF740/MA0753.1/Jaspar

Match Rank:5
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CGKCTTYYSCCCTCAM
------CCCCCCCCAC
 A G T C T C A G C A G T A G T C A C G T A G C T A G C T A G T C T A G C A G T C A G T C G A T C A G C T A G T C G T C A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G T A C G T A C G A T C G A T C A G T C T G A C G T A C G T C A G A T C

PB0100.1_Zfp740_1/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CGKCTTYYSCCCTCAM---
---CCCCCCCCCCCACTTG
 A G T C T C A G C A G T A G T C A C G T A G C T A G C T A G T C T A G C A G T C A G T C G A T C A G C T A G T C G T C A G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A G T C T A G C A G T C T A G C T G A C G T A C G T A C G A T C G A T C G T A C G T A C G T C A G T A C G C A T G A C T A T C G

Spz1/MA0111.1/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CGKCTTYYSCCCTCAM
--GCTGTTACCCT---
 A G T C T C A G C A G T A G T C A C G T A G C T A G C T A G T C T A G C A G T C A G T C G A T C A G C T A G T C G T C A G T A C
A C G T A C G T A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:8
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CGKCTTYYSCCCTCAM-
------AGCCACTCAAG
 A G T C T C A G C A G T A G T C A C G T A G C T A G C T A G T C T A G C A G T C A G T C G A T C A G C T A G T C G T C A G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

PB0114.1_Egr1_2/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CGKCTTYYSCCCTCAM--
--NNAGTCCCACTCNNNN
 A G T C T C A G C A G T A G T C A C G T A G C T A G C T A G T C T A G C A G T C A G T C G A T C A G C T A G T C G T C A G T A C A C G T A C G T
A C G T A C G T T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CGKCTTYYSCCCTCAM
TGACCTTTGCCCTA--
 A G T C T C A G C A G T A G T C A C G T A G C T A G C T A G T C T A G C A G T C A G T C G A T C A G C T A G T C G T C A G T A C
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T A C G T