Information for 1-AGGTGTGAGGATC (Motif 4)

C T G A A C T G C A T G C G A T C T A G A C G T C T A G C G T A A C T G A C T G C G T A A C G T T G A C
Reverse Opposite:
A C T G C G T A A C G T A G T C G T A C G A C T A G T C G T C A A G T C C G T A G A T C A G T C A G C T
p-value:1e-11
log p-value:-2.650e+01
Information Content per bp:1.801
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif2.38%
Number of Background Sequences with motif13.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets50.1 +/- 26.5bp
Average Position of motif in Background54.5 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX15/MA0803.1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AGGTGTGAGGATC
AGGTGTGA-----
 C T G A A C T G C A T G C G A T C T A G A C G T C T A G C G T A A C T G A C T G C G T A A C G T T G A C
C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AGGTGTGAGGATC
AGGTGTGA-----
 C T G A A C T G C A T G C G A T C T A G A C G T C T A G C G T A A C T G A C T G C G T A A C G T T G A C
C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AGGTGTGAGGATC
TAGGTGTGAAG---
 A C G T C T G A A C T G C A T G C G A T C T A G A C G T C T A G C G T A A C T G A C T G C G T A A C G T T G A C
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AGGTGTGAGGATC
AGGTGTGA-----
 C T G A A C T G C A T G C G A T C T A G A C G T C T A G C G T A A C T G A C T G C G T A A C G T T G A C
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AGGTGTGAGGATC
AGGTGTGA-----
 C T G A A C T G C A T G C G A T C T A G A C G T C T A G C G T A A C T G A C T G C G T A A C G T T G A C
C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:6
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AGGTGTGAGGATC
AGGTGTGA-----
 C T G A A C T G C A T G C G A T C T A G A C G T C T A G C G T A A C T G A C T G C G T A A C G T T G A C
C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AGGTGTGAGGATC
AAGGTGTGAAAAT-
 A C G T C T G A A C T G C A T G C G A T C T A G A C G T C T A G C G T A A C T G A C T G C G T A A C G T T G A C
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGGTGTGAGGATC
AAGGTGTGAA----
 A C G T C T G A A C T G C A T G C G A T C T A G A C G T C T A G C G T A A C T G A C T G C G T A A C G T T G A C
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----AGGTGTGAGGATC
GAAAAGGTGTGAAAATT
 A C G T A C G T A C G T A C G T C T G A A C T G C A T G C G A T C T A G A C G T C T A G C G T A A C T G A C T G C G T A A C G T T G A C
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGGTGTGAGGATC
AGGTGTCA-----
 C T G A A C T G C A T G C G A T C T A G A C G T C T A G C G T A A C T G A C T G C G T A A C G T T G A C
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T A C G T