Information for 22-CCCGCAGACGTCACTC (Motif 39)

A G T C A G T C A G T C A C T G A G T C C G T A A C T G C G T A A G T C A C T G A C G T A G T C C G T A A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C G T A C T G C G T A A G T C A C T G A C G T A G T C A C G T A C T G A G T C A C T G A C T G A C T G
p-value:1e-4
log p-value:-9.544e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.6 +/- 25.8bp
Average Position of motif in Background30.5 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRE(bZIP)/Promoter/Homer

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CCCGCAGACGTCACTC
--CGGTGACGTCAC--
 A G T C A G T C A G T C A C T G A G T C C G T A A C T G C G T A A G T C A C T G A C G T A G T C C G T A A G T C A C G T A G T C
A C G T A C G T A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:2
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:CCCGCAGACGTCACTC
-------ACGTCA---
 A G T C A G T C A G T C A C T G A G T C C G T A A C T G C G T A A G T C A C T G A C G T A G T C C G T A A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T

CREB1/MA0018.2/Jaspar

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CCCGCAGACGTCACTC
-----TGACGTCA---
 A G T C A G T C A G T C A C T G A G T C C G T A A C T G C G T A A G T C A C T G A C G T A G T C C G T A A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T G C A T A C T G C T G A A G T C A T C G A C G T A T G C T C G A A C G T A C G T A C G T

PB0004.1_Atf1_1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCCGCAGACGTCACTC-
-NCGATGACGTCATCGN
 A G T C A G T C A G T C A C T G A G T C C G T A A C T G C G T A A G T C A C T G A C G T A G T C C G T A A G T C A C G T A G T C A C G T
A C G T G A C T G A T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T G T A C T C A G G A C T

Atf1/MA0604.1/Jaspar

Match Rank:5
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CCCGCAGACGTCACTC
------TACGTCAT--
 A G T C A G T C A G T C A C T G A G T C C G T A A C T G C G T A A G T C A C T G A C G T A G T C C G T A A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T A C G T A C G T

PB0038.1_Jundm2_1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCCGCAGACGTCACTC-
-CCGATGACGTCATCGT
 A G T C A G T C A G T C A C T G A G T C C G T A A C T G C G T A A G T C A C T G A C G T A G T C C G T A A G T C A C G T A G T C A C G T
A C G T A T G C A T G C A C T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T T G A C C T G A A G C T G T A C T C A G G A C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CCCGCAGACGTCACTC
---CCAGACRSVB---
 A G T C A G T C A G T C A C T G A G T C C G T A A C T G C G T A A G T C A C T G A C G T A G T C C G T A A G T C A C G T A G T C
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCCGCAGACGTCACTC
--NGRTGACGTCAY--
 A G T C A G T C A G T C A C T G A G T C C G T A A C T G C G T A A G T C A C T G A C G T A G T C C G T A A G T C A C G T A G T C
A C G T A C G T T A G C C T A G T C G A G A C T A C T G C T G A A G T C T C A G G C A T T G A C C T G A A G C T A C G T A C G T

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CCCGCAGACGTCACTC
--NGATGACGTCAT--
 A G T C A G T C A G T C A C T G A G T C C G T A A C T G C G T A A G T C A C T G A C G T A G T C C G T A A G T C A C G T A G T C
A C G T A C G T A G C T C T A G T C G A A C G T A C T G C T G A A G T C T C A G A G C T G T A C C G T A A G C T A C G T A C G T

JDP2(var.2)/MA0656.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCCGCAGACGTCACTC
---GATGACGTCATC-
 A G T C A G T C A G T C A C T G A G T C C G T A A C T G C G T A A G T C A C T G A C G T A G T C C G T A A G T C A C G T A G T C
A C G T A C G T A C G T T A C G T C G A A G C T C A T G G T C A A G T C T C A G G A C T T G A C T G C A A G C T T G A C A C G T