Information for 23-CACGACCCTGACC (Motif 38)

A G T C C G T A A G T C A C T G C G T A A G T C A G T C A G T C A C G T A C T G C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A G T C C G T A A C T G A C T G A C T G A C G T A G T C A C T G A C G T A C T G
p-value:1e-4
log p-value:-9.544e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.0 +/- 23.6bp
Average Position of motif in Background67.9 +/- 11.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CACGACCCTGACC-
--TGACCTTGACCT
 A G T C C G T A A G T C A C T G C G T A A G T C A G T C A G T C A C G T A C T G C G T A A G T C A G T C A C G T
A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CACGACCCTGACC-
--TGACCTTGACCT
 A G T C C G T A A G T C A C T G C G T A A G T C A G T C A G T C A C G T A C T G C G T A A G T C A G T C A C G T
A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CACGACCCTGACC
-AAGACCCYYN--
 A G T C C G T A A G T C A C T G C G T A A G T C A G T C A G T C A C G T A C T G C G T A A G T C A G T C
A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CACGACCCTGACC
-ATGACCTTGAA-
 A G T C C G T A A G T C A C T G C G T A A G T C A G T C A G T C A C G T A C T G C G T A A G T C A G T C
A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.59
Offset:8
Orientation:reverse strand
Alignment:CACGACCCTGACC-
--------TGACCT
 A G T C C G T A A G T C A C T G C G T A A G T C A G T C A G T C A C G T A C T G C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

PB0014.1_Esrra_1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CACGACCCTGACC-
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A G T C C G T A A G T C A C T G C G T A A G T C A G T C A G T C A C G T A C T G C G T A A G T C A G T C A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

ESRRB/MA0141.3/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CACGACCCTGACC
NATGACCTTGA--
 A G T C C G T A A G T C A C T G C G T A A G T C A G T C A G T C A C G T A C T G C G T A A G T C A G T C
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:CACGACCCTGACC---
--------TGACCYCT
 A G T C C G T A A G T C A C T G C G T A A G T C A G T C A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CACGACCCTGACC
-ATGACCTTGA--
 A G T C C G T A A G T C A C T G C G T A A G T C A G T C A G T C A C G T A C T G C G T A A G T C A G T C
A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CACGACCCTGACC--
GCTGACCTTGAACTN
 A G T C C G T A A G T C A C T G C G T A A G T C A G T C A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T