Information for 21-GGTTAATTAGGAATCT (Motif 37)

A C T G A C T G A C G T A C G T C G T A C G T A A C G T C A G T G T C A A C T G A C T G T C G A C T G A A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A G C T A G C T A G T C A G T C A C G T G T C A C G T A A C G T A C G T C G T A C G T A A G T C G T A C
p-value:1e-4
log p-value:-1.093e+01
Information Content per bp:1.917
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets17.5 +/- 7.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0127.1_Nobox/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GGTTAATTAGGAATCT
CGCGCTAATTAGGTATC-
 A C G T A C G T A C T G A C T G A C G T A C G T C G T A C G T A A C G T C A G T G T C A A C T G A C T G T C G A C T G A A C G T A G T C A C G T
T A G C A T C G A T G C T C A G A G T C G A C T C T G A C G T A G C A T A G C T C T G A T C A G A C T G G C A T C G T A G A C T A T G C A C G T

mix-a/MA0621.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGTTAATTAGGAATCT
AATTAATTAGT-----
 A C T G A C T G A C G T A C G T C G T A C G T A A C G T C A G T G T C A A C T G A C T G T C G A C T G A A C G T A G T C A C G T
C G T A C T G A G A C T A C G T C G T A C G T A A C G T A C G T C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

LHX2/MA0700.1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGTTAATTAGGAATCT
-NNTAATTAGN-----
 A C T G A C T G A C G T A C G T C G T A C G T A A C G T C A G T G T C A A C T G A C T G T C G A C T G A A C G T A G T C A C G T
A C G T T A C G G A C T G A C T T G C A C G T A A G C T C A G T C T G A T C A G A G C T A C G T A C G T A C G T A C G T A C G T

LBX1/MA0618.1/Jaspar

Match Rank:4
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GGTTAATTAGGAATCT
--TTAATTAG------
 A C T G A C T G A C G T A C G T C G T A C G T A A C G T C A G T G T C A A C T G A C T G T C G A C T G A A C G T A G T C A C G T
A C G T A C G T C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PH0051.1_Hoxa4/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GGTTAATTAGGAATCT
CNAGTTAATTAATAANN-
 A C G T A C G T A C T G A C T G A C G T A C G T C G T A C G T A A C G T C A G T G T C A A C T G A C T G T C G A C T G A A C G T A G T C A C G T
T G A C T C G A G T C A T C A G G C A T G A C T G T C A C G T A G A C T A C G T C T G A C G T A A G C T C T G A C T G A G A C T G A T C A C G T

NOTO/MA0710.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGTTAATTAGGAATCT
-NNTAATTAGN-----
 A C T G A C T G A C G T A C G T C G T A C G T A A C G T C A G T G T C A A C T G A C T G T C G A C T G A A C G T A G T C A C G T
A C G T T A C G A G T C G A C T G T C A C G T A A C G T C A G T C G T A C T A G A T G C A C G T A C G T A C G T A C G T A C G T

PH0153.1_Prop1/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGTTAATTAGGAATCT
CGAATTAATTAAGAAAC-
 A C G T A C G T A C T G A C T G A C G T A C G T C G T A C G T A A C G T C A G T G T C A A C T G A C T G T C G A C T G A A C G T A G T C A C G T
T G A C T C A G T G C A T C G A G A C T G A C T C G T A C G T A G A C T A C G T C T G A C T G A A C T G C G T A C G T A C T G A G A T C A C G T

MEOX1/MA0661.1/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGTTAATTAGGAATCT
-GNTAATTAGN-----
 A C T G A C T G A C G T A C G T C G T A C G T A A C G T C A G T G T C A A C T G A C T G T C G A C T G A A C G T A G T C A C G T
A C G T A T C G C A G T G A C T T G C A C T G A G C A T A C G T C T G A A T C G A G T C A C G T A C G T A C G T A C G T A C G T

GSX1/MA0892.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GGTTAATTAGGAATCT
-NNTAATTAGN-----
 A C T G A C T G A C G T A C G T C G T A C G T A A C G T C A G T G T C A A C T G A C T G T C G A C T G A A C G T A G T C A C G T
A C G T C G A T A G C T G C A T C G T A C G T A A G C T C A G T C T G A T A C G C A T G A C G T A C G T A C G T A C G T A C G T

NKX6-1/MA0674.1/Jaspar

Match Rank:10
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GGTTAATTAGGAATCT
--TTAATTAN------
 A C T G A C T G A C G T A C G T C G T A C G T A A C G T C A G T G T C A A C T G A C T G T C G A C T G A A C G T A G T C A C G T
A C G T A C G T C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T