Information for 7-TGGATGTCAC (Motif 31)

A G C T A C T G A C T G C G T A C G A T A C T G A C G T A G T C C T G A A G T C
Reverse Opposite:
A C T G A G C T A C T G G T C A A G T C C G T A A C G T A G T C A G T C C T G A
p-value:1e-5
log p-value:-1.193e+01
Information Content per bp:1.887
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif2.38%
Number of Background Sequences with motif112.3
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets59.0 +/- 27.6bp
Average Position of motif in Background51.5 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGGATGTCAC---
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A G C T A C T G A C T G C G T A C G A T A C T G A C G T A G T C C T G A A G T C A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGGATGTCAC-
-VGCTGWCAVB
 A G C T A C T G A C T G C G T A C G A T A C T G A C G T A G T C C T G A A G T C A C G T
A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

MEIS3/MA0775.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TGGATGTCAC
--CCTGTCAA
 A G C T A C T G A C T G C G T A C G A T A C T G A C G T A G T C C T G A A G T C
A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

ETV5/MA0765.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGGATGTCAC
ACCGGAAGTG--
 A C G T A C G T A G C T A C T G A C T G C G T A C G A T A C T G A C G T A G T C C T G A A G T C
C T G A T A G C T G A C A C T G A C T G G C T A G C T A T C A G A G C T C T A G A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TGGATGTCAC
---NTGTCAN
 A G C T A C T G A C T G C G T A C G A T A C T G A C G T A G T C C T G A A G T C
A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TGGATGTCAC
--AAGGTCAC
 A G C T A C T G A C T G C G T A C G A T A C T G A C G T A G T C C T G A A G T C
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

Pax2/MA0067.1/Jaspar

Match Rank:7
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TGGATGTCAC--
----AGTCACGC
 A G C T A C T G A C T G C G T A C G A T A C T G A C G T A G T C C T G A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGGATGTCAC
-GGTTGGCAT
 A G C T A C T G A C T G C G T A C G A T A C T G A C G T A G T C C T G A A G T C
A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGGATGTCAC
-ARNTGACA-
 A G C T A C T G A C T G C G T A C G A T A C T G A C G T A G T C C T G A A G T C
A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGGATGTCAC--
TGTCTGDCACCT
 A G C T A C T G A C T G C G T A C G A T A C T G A C G T A G T C C T G A A G T C A C G T A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T