p-value: | 1e-6 |
log p-value: | -1.507e+01 |
Information Content per bp: | 1.936 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 1.02% |
Number of Background Sequences with motif | 2.2 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 49.2 +/- 27.5bp |
Average Position of motif in Background | 64.9 +/- 23.3bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.67 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.76 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGTCTGTCACTGT TGTCTGDCACCT- |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 2 |
Score: | 0.72 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGTCTGTCACTGT CTGTCTGTCACCT- |
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Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer
Match Rank: | 3 |
Score: | 0.64 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TGTCTGTCACTGT -VGCTGWCAVB-- |
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PH0141.1_Pknox2/Jaspar
Match Rank: | 4 |
Score: | 0.64 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TGTCTGTCACTGT AAGCACCTGTCAATAT |
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MEIS3/MA0775.1/Jaspar
Match Rank: | 5 |
Score: | 0.64 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TGTCTGTCACTGT --CCTGTCAA--- |
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MEIS2/MA0774.1/Jaspar
Match Rank: | 6 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TGTCTGTCACTGT --GCTGTCAA--- |
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MEIS1/MA0498.2/Jaspar
Match Rank: | 7 |
Score: | 0.62 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TGTCTGTCACTGT ---NTGTCAN--- |
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PH0169.1_Tgif1/Jaspar
Match Rank: | 8 |
Score: | 0.62 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TGTCTGTCACTGT- NNNCAGCTGTCAATATN |
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PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer
Match Rank: | 9 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TGTCTGTCACTGT -GSCTGTCACTCA |
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Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer
Match Rank: | 10 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TGTCTGTCACTGT SCTGTCAVTCAV--- |
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