Information for 6-GCWCTGGGGTAYC (Motif 18)

A C T G A G T C C G A T A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G T A G A C T A G T C
Reverse Opposite:
C T A G C T A G A C G T C G T A A G T C A G T C A G T C A G T C C G T A A C T G G C A T A C T G A G T C
p-value:1e-7
log p-value:-1.714e+01
Information Content per bp:1.911
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.8 +/- 25.3bp
Average Position of motif in Background7.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0156.1_Plagl1_2/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GCWCTGGGGTAYC----
GCTGGGGGGTACCCCTT
 A C T G A G T C C G A T A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G T A G A C T A G T C A C G T A C G T A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

PH0162.1_Six2/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GCWCTGGGGTAYC------
--AATGGGGTATCACGTTT
 A C T G A G T C C G A T A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G T A G A C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

PH0161.1_Six1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GCWCTGGGGTAYC------
--GATGGGGTATCATTTTT
 A C T G A G T C C G A T A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G T A G A C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

PB0059.1_Six6_1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GCWCTGGGGTAYC------
--AATAGGGTATCATATAT
 A C T G A G T C C G A T A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G T A G A C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PH0165.1_Six6_1/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GCWCTGGGGTAYC------
--AATAGGGTATCAATTAT
 A C T G A G T C C G A T A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G T A G A C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T

Six3/MA0631.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCWCTGGGGTAYC------
--GATAGGGTATCACTAAT
 A C T G A G T C C G A T A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G T A G A C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCWCTGGGGTAYC------
--GATAGGGTATCACTAAT
 A C T G A G T C C G A T A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G T A G A C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCWCTGGGGTAYC------
--AATAGGGTATCAATATT
 A C T G A G T C C G A T A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G T A G A C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCWCTGGGGTAYC
TGCCCNGGGGCA--
 A C G T A C T G A G T C C G A T A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G T A G A C T A G T C
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCWCTGGGGTAYC
TGCCCTNGGGCA--
 A C G T A C T G A G T C C G A T A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G T A G A C T A G T C
G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T