Information for 10-CWCAGSCCCYCWGGCC (Motif 14)

G T A C C G T A A T G C G T C A C T A G T A G C A T G C G T A C G A T C G A C T A T G C C G T A A C T G A C T G A T G C A G T C
Reverse Opposite:
C T A G A T C G G T A C G T A C C G A T T A C G C T G A C T A G C A T G T A C G A T C G A G T C C A G T A T C G G C A T A C T G
p-value:1e-7
log p-value:-1.821e+01
Information Content per bp:1.617
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif5.78%
Number of Background Sequences with motif490.6
Percentage of Background Sequences with motif1.00%
Average Position of motif in Targets41.0 +/- 24.9bp
Average Position of motif in Background50.3 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CWCAGSCCCYCWGGCC
CACAGN----------
 G T A C C G T A A T G C G T C A C T A G T A G C A T G C G T A C G A T C G A C T A T G C C G T A A C T G A C T G A T G C A G T C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CWCAGSCCCYCWGGCC--
------GCCTCAGGGCAT
 G T A C C G T A A T G C G T C A C T A G T A G C A T G C G T A C G A T C G A C T A T G C C G T A A C T G A C T G A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:3
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CWCAGSCCCYCWGGCC--
------SCCTSAGGSCAW
 G T A C C G T A A T G C G T C A C T A G T A G C A T G C G T A C G A T C G A C T A T G C C G T A A C T G A C T G A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:4
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CWCAGSCCCYCWGGCC---
---TGACCCAGTGACCTAC
 G T A C C G T A A T G C G T C A C T A G T A G C A T G C G T A C G A T C G A C T A T G C C G T A A C T G A C T G A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:5
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CWCAGSCCCYCWGGCC-
----TGCCCNNAGGGCA
 G T A C C G T A A T G C G T C A C T A G T A G C A T G C G T A C G A T C G A C T A T G C C G T A A C T G A C T G A T G C A G T C A C G T
A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:6
Score:0.49
Offset:4
Orientation:forward strand
Alignment:CWCAGSCCCYCWGGCC-
----TGCCCTGAGGGCA
 G T A C C G T A A T G C G T C A C T A G T A G C A T G C G T A C G A T C G A C T A T G C C G T A A C T G A C T G A T G C A G T C A C G T
A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.49
Offset:3
Orientation:forward strand
Alignment:CWCAGSCCCYCWGGCC
---AGGCCTNG-----
 G T A C C G T A A T G C G T C A C T A G T A G C A T G C G T A C G A T C G A C T A T G C C G T A A C T G A C T G A T G C A G T C
A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:8
Score:0.48
Offset:3
Orientation:forward strand
Alignment:CWCAGSCCCYCWGGCC
---TGCCCTGAGGGCA
 G T A C C G T A A T G C G T C A C T A G T A G C A T G C G T A C G A T C G A C T A T G C C G T A A C T G A C T G A T G C A G T C
A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:9
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:CWCAGSCCCYCWGGCC
-SCAGYCADGCATGAC
 G T A C C G T A A T G C G T C A C T A G T A G C A T G C G T A C G A T C G A C T A T G C C G T A A C T G A C T G A T G C A G T C
A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:10
Score:0.47
Offset:-3
Orientation:forward strand
Alignment:---CWCAGSCCCYCWGGCC
AGCCTCAGGCA--------
 A C G T A C G T A C G T G T A C C G T A A T G C G T C A C T A G T A G C A T G C G T A C G A T C G A C T A T G C C G T A A C T G A C T G A T G C A G T C
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T