Information for 7-VCAYWCTCACCATCAG (Motif 11)

T C G A A G T C G T C A A G T C C G A T A T G C A C G T T G A C G C T A A G T C A G T C G T C A G A C T G T A C G T C A A C T G
Reverse Opposite:
T A G C A C G T C A T G C G T A A C G T A C T G C T A G C A G T A C T G G T C A A T C G C G T A C T A G A C G T A C T G A C G T
p-value:1e-9
log p-value:-2.146e+01
Information Content per bp:1.684
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.70%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.2 +/- 24.0bp
Average Position of motif in Background56.8 +/- 9.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:VCAYWCTCACCATCAG
--NNACTTACCTN---
 T C G A A G T C G T C A A G T C C G A T A T G C A C G T T G A C G C T A A G T C A G T C G T C A G A C T G T A C G T C A A C T G
A C G T A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:2
Score:0.54
Offset:1
Orientation:forward strand
Alignment:VCAYWCTCACCATCAG
-CTGAGTCAGCAATTT
 T C G A A G T C G T C A A G T C C G A T A T G C A C G T T G A C G C T A A G T C A G T C G T C A G A C T G T A C G T C A A C T G
A C G T G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T

MAFF/MA0495.1/Jaspar

Match Rank:3
Score:0.53
Offset:0
Orientation:forward strand
Alignment:VCAYWCTCACCATCAG--
GCTGAGTCAGCAATTTTT
 T C G A A G T C G T C A A G T C C G A T A T G C A C G T T G A C G C T A A G T C A G T C G T C A G A C T G T A C G T C A A C T G A C G T A C G T
A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:4
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--VCAYWCTCACCATCAG
TGACCCAGTGACCTAC--
 A C G T A C G T T C G A A G T C G T C A A G T C C G A T A T G C A C G T T G A C G C T A A G T C A G T C G T C A G A C T G T A C G T C A A C T G
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:5
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----VCAYWCTCACCATCAG
AGCAACAGCCGCACC-----
 A C G T A C G T A C G T A C G T T C G A A G T C G T C A A G T C C G A T A T G C A C G T T G A C G C T A A G T C A G T C G T C A G A C T G T A C G T C A A C T G
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T A C G T A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:6
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:VCAYWCTCACCATCAG
--SCTGTCARCACC--
 T C G A A G T C G T C A A G T C C G A T A T G C A C G T T G A C G C T A A G T C A G T C G T C A G A C T G T A C G T C A A C T G
A C G T A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.51
Offset:3
Orientation:forward strand
Alignment:VCAYWCTCACCATCAG
---ATCACCCCAT---
 T C G A A G T C G T C A A G T C C G A T A T G C A C G T T G A C G C T A A G T C A G T C G T C A G A C T G T A C G T C A A C T G
A C G T A C G T A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:8
Score:0.51
Offset:-6
Orientation:reverse strand
Alignment:------VCAYWCTCACCATCAG
NNNTGAACTCNNTGACCTCN--
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C G T C A A G T C C G A T A T G C A C G T T G A C G C T A A G T C A G T C G T C A G A C T G T A C G T C A A C T G
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:VCAYWCTCACCATCAG
-CNGTCACGCCAC---
 T C G A A G T C G T C A A G T C C G A T A T G C A C G T T G A C G C T A A G T C A G T C G T C A G A C T G T A C G T C A A C T G
A C G T G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:10
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:VCAYWCTCACCATCAG
------TCCCCA----
 T C G A A G T C G T C A A G T C C G A T A T G C A C G T T G A C G C T A A G T C A G T C G T C A G A C T G T A C G T C A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T