p-value: | 1e-9 |
log p-value: | -2.231e+01 |
Information Content per bp: | 1.653 |
Number of Target Sequences with motif | 20.0 |
Percentage of Target Sequences with motif | 6.80% |
Number of Background Sequences with motif | 540.2 |
Percentage of Background Sequences with motif | 1.11% |
Average Position of motif in Targets | 46.9 +/- 23.6bp |
Average Position of motif in Background | 49.6 +/- 32.0bp |
Strand Bias (log2 ratio + to - strand density) | 2.7 |
Multiplicity (# of sites on avg that occur together) | 1.15 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 1 |
Score: | 0.55 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GCASMCAGTCRGG TGGCAGNCTGCCAG- |
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Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 2 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCASMCAGTCRGG-- SCAGYCADGCATGAC |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 3 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCASMCAGTCRGG AGGTGNCAGACAG- |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 4 |
Score: | 0.54 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GCASMCAGTCRGG ----CCAGACAG- |
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MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer
Match Rank: | 5 |
Score: | 0.53 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GCASMCAGTCRGG- ----TGAGTCAGCA |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 6 |
Score: | 0.52 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GCASMCAGTCRGG ---VBSYGTCTGG |
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PB0130.1_Gm397_2/Jaspar
Match Rank: | 7 |
Score: | 0.52 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GCASMCAGTCRGG AGCGGCACACACGCAA- |
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NFY(CCAAT)/Promoter/Homer
Match Rank: | 8 |
Score: | 0.50 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GCASMCAGTCRGG --AGCCAATCGG- |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 9 |
Score: | 0.49 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | GCASMCAGTCRGG -----TWGTCTGV |
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Mafb/MA0117.2/Jaspar
Match Rank: | 10 |
Score: | 0.48 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | GCASMCAGTCRGG----- ------NGTCAGCANTTT |
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