Information for 11-TAAGTTATGG (Motif 33)

A C G T C G T A C G T A A C T G A C G T A C G T C G T A A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C G T C G T A C G T A A G T C A C G T A C G T C G T A
p-value:1e-5
log p-value:-1.227e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.3 +/- 4.9bp
Average Position of motif in Background44.1 +/- 13.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TAAGTTATGG--
TGATTTATGGCC
 A C G T C G T A C G T A A C T G A C G T A C G T C G T A A C G T A C T G A C T G A C G T A C G T
C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

PB0176.1_Sox5_2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TAAGTTATGG--
NNCTNAATTATGANN
 A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C G T C G T A A C G T A C T G A C T G A C G T A C G T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

Hoxc9/MA0485.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TAAGTTATGG--
NTGATTTATGGCC
 A C G T A C G T C G T A C G T A A C T G A C G T A C G T C G T A A C G T A C T G A C T G A C G T A C G T
T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

Hoxa9/MA0594.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TAAGTTATGG-
TGATTTATGGC
 A C G T C G T A C G T A A C T G A C G T A C G T C G T A A C G T A C T G A C T G A C G T
C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TAAGTTATGG--
TGATTTATGGCC
 A C G T C G T A C G T A A C T G A C G T A C G T C G T A A C G T A C T G A C T G A C G T A C G T
C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C

PB0121.1_Foxj3_2/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TAAGTTATGG----
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C G T C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TAAGTTATGG-
NNAATTAGTCACGGT
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C G T C G T A A C G T A C T G A C T G A C G T
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

Nkx3-1/MA0124.2/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TAAGTTATGG
TTAAGTGGT--
 A C G T A C G T C G T A C G T A A C T G A C G T A C G T C G T A A C G T A C T G A C T G
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TAAGTTATGG
TTAAGTGGN--
 A C G T A C G T C G T A C G T A A C T G A C G T A C G T C G T A A C G T A C T G A C T G
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TAAGTTATGG
ACTAGTTAAC-
 A C G T A C G T C G T A C G T A A C T G A C G T A C G T C G T A A C G T A C T G A C T G
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T