Information for 3-CAGGACCAATGACCTG (Motif 3)

T G A C C T G A T C A G A T C G G C T A G T A C G T A C T G C A C G T A C G A T A C T G C G T A T A G C G T A C A C G T T C A G
Reverse Opposite:
A G T C G T C A A C T G A T C G A C G T A G T C C G T A A C G T A C G T A C T G A C T G C A G T A T G C A G T C A G C T A C T G
p-value:1e-11
log p-value:-2.753e+01
Information Content per bp:1.779
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.7 +/- 26.2bp
Average Position of motif in Background15.8 +/- 7.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:1
Score:0.62
Offset:7
Orientation:forward strand
Alignment:CAGGACCAATGACCTG
-------CATGAC---
 T G A C C T G A T C A G A T C G G C T A G T A C G T A C T G C A C G T A C G A T A C T G C G T A T A G C G T A C A C G T T C A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.59
Offset:9
Orientation:reverse strand
Alignment:CAGGACCAATGACCTG
---------TGACCT-
 T G A C C T G A T C A G A T C G G C T A G T A C G T A C T G C A C G T A C G A T A C T G C G T A T A G C G T A C A C G T T C A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.58
Offset:9
Orientation:reverse strand
Alignment:CAGGACCAATGACCTG-
---------TGACCTYA
 T G A C C T G A T C A G A T C G G C T A G T A C G T A C T G C A C G T A C G A T A C T G C G T A T A G C G T A C A C G T T C A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

RORA/MA0071.1/Jaspar

Match Rank:4
Score:0.57
Offset:9
Orientation:reverse strand
Alignment:CAGGACCAATGACCTG---
---------TGACCTTGAT
 T G A C C T G A T C A G A T C G G C T A G T A C G T A C T G C A C G T A C G A T A C T G C G T A T A G C G T A C A C G T T C A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

NR2F1/MA0017.2/Jaspar

Match Rank:5
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CAGGACCAATGACCTG--
-----CNNTTGACCTTTG
 T G A C C T G A T C A G A T C G G C T A G T A C G T A C T G C A C G T A C G A T A C T G C G T A T A G C G T A C A C G T T C A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

NFYB/MA0502.1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CAGGACCAATGACCTG
AAATGGACCAATCAG---
 A C G T A C G T T G A C C T G A T C A G A T C G G C T A G T A C G T A C T G C A C G T A C G A T A C T G C G T A T A G C G T A C A C G T T C A G
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T A C G T A C G T

Atf3/MA0605.1/Jaspar

Match Rank:7
Score:0.55
Offset:7
Orientation:forward strand
Alignment:CAGGACCAATGACCTG
-------GATGACGT-
 T G A C C T G A T C A G A T C G G C T A G T A C G T A C T G C A C G T A C G A T A C T G C G T A T A G C G T A C A C G T T C A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T G A A C G T A C T G C G T A A G T C C T A G G A C T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAGGACCAATGACCTG
TCAGNGAGCGTGAC---
 A C G T T G A C C T G A T C A G A T C G G C T A G T A C G T A C T G C A C G T A C G A T A C T G C G T A T A G C G T A C A C G T T C A G
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:9
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CAGGACCAATGACCTG
------NCGTGACN--
 T G A C C T G A T C A G A T C G G C T A G T A C G T A C T G C A C G T A C G A T A C T G C G T A T A G C G T A C A C G T T C A G
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CAGGACCAATGACCTG
-NAGGTCANTGACCT-
 T G A C C T G A T C A G A T C G G C T A G T A C G T A C T G C A C G T A C G A T A C T G C G T A T A G C G T A C A C G T T C A G
A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T A C G T