Information for 3-GGACTAGAAG (Motif 18)

A C T G T A C G C G T A A G T C A G C T C G T A A C T G C G T A C G T A A C T G
Reverse Opposite:
A G T C C G A T A C G T T G A C A C G T C T G A C T A G C G A T A T G C A G T C
p-value:1e-9
log p-value:-2.195e+01
Information Content per bp:1.812
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.46%
Number of Background Sequences with motif190.7
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets60.4 +/- 23.4bp
Average Position of motif in Background50.0 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0090.1_Zbtb12_1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGACTAGAAG-----
NNGATCTAGAACCTNNN
 A C G T A C G T A C T G T A C G C G T A A G T C A G C T C G T A A C T G C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGACTAGAAG----
NGNTCTAGAACCNGV
 A C G T A C T G T A C G C G T A A G T C A G C T C G T A A C T G C G T A C G T A A C T G A C G T A C G T A C G T A C G T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

SMAD3/MA0795.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGACTAGAAG
TGTCTAGACG
 A C T G T A C G C G T A A G T C A G C T C G T A A C T G C G T A C G T A A C T G
C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GGACTAGAAG-
-----NGAAGC
 A C T G T A C G C G T A A G T C A G C T C G T A A C T G C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

HLTF/MA0109.1/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GGACTAGAAG---
---NNATAAGGNN
 A C T G T A C G C G T A A G T C A G C T C G T A A C T G C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

TATA-Box(TBP)/Promoter/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGACTAGAAG-
GNCTATAAAAGG
 A C G T A C T G T A C G C G T A A G T C A G C T C G T A A C T G C G T A C G T A A C T G A C G T
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGACTAGAAG
GGATTAGC--
 A C T G T A C G C G T A A G T C A G C T C G T A A C T G C G T A C G T A A C T G
T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGACTAGAAG
AGGCCTAG---
 A C G T A C T G T A C G C G T A A G T C A G C T C G T A A C T G C G T A C G T A A C T G
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GGACTAGAAG
NNGGATTAGN--
 A C G T A C G T A C T G T A C G C G T A A G T C A G C T C G T A A C T G C G T A C G T A A C T G
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGACTAGAAG
GGGATTAA---
 A C G T A C T G T A C G C G T A A G T C A G C T C G T A A C T G C G T A C G T A A C T G
C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T A C G T