p-value: | 1e-10 |
log p-value: | -2.376e+01 |
Information Content per bp: | 1.830 |
Number of Target Sequences with motif | 9.0 |
Percentage of Target Sequences with motif | 1.17% |
Number of Background Sequences with motif | 21.0 |
Percentage of Background Sequences with motif | 0.04% |
Average Position of motif in Targets | 39.1 +/- 21.2bp |
Average Position of motif in Background | 48.0 +/- 29.8bp |
Strand Bias (log2 ratio + to - strand density) | -1.8 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GCYAGACTGGCTG -CCAGACAG---- |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GCYAGACTGGCTG -CCAGACRSVB-- |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 3 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GCYAGACTGGCTG ATGCCAGACN----- |
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POL010.1_DCE_S_III/Jaspar
Match Rank: | 4 |
Score: | 0.55 |
Offset: | 8 |
Orientation: | reverse strand |
Alignment: | GCYAGACTGGCTG --------NGCTN |
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Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 5 |
Score: | 0.54 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GCYAGACTGGCTG AGGTGHCAGACA----- |
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GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer
Match Rank: | 6 |
Score: | 0.54 |
Offset: | -7 |
Orientation: | reverse strand |
Alignment: | -------GCYAGACTGGCTG VAAACYKGTHWAACMRGTTT |
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Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 7 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GCYAGACTGGCTG- GTCATGCHTGRCTGS |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 8 |
Score: | 0.54 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GCYAGACTGGCTG -BCAGACWA---- |
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POL004.1_CCAAT-box/Jaspar
Match Rank: | 9 |
Score: | 0.54 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GCYAGACTGGCTG-- ---TGATTGGCTANN |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GCYAGACTGGCTG AGGTGNCAGACAG---- |
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