Information for 1-CYTCTGGCACAGGCCA (Motif 1)

A G T C A G C T A C G T A T G C A C G T A C T G A T C G A G T C G T C A A T G C C G T A A C T G A C T G A T G C G T A C G T C A
Reverse Opposite:
A C G T A C T G A T C G A G T C A G T C A C G T A T C G A C G T A C T G A T G C A G T C C G T A A T C G G T C A C T G A C T A G
p-value:1e-13
log p-value:-3.168e+01
Information Content per bp:1.830
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.8 +/- 23.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A/MA0003.3/Jaspar

Match Rank:1
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CYTCTGGCACAGGCCA
----CGCCTCAGGCA-
 A G T C A G C T A C G T A T G C A C G T A C T G A T C G A G T C G T C A A T G C C G T A A C T G A C T G A T G C G T A C G T C A
A C G T A C G T A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:2
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CYTCTGGCACAGGCCA
----AGCCTCAGGCA-
 A G T C A G C T A C G T A T G C A C G T A C T G A T C G A G T C G T C A A T G C C G T A A C T G A C T G A T G C G T A C G T C A
A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CYTCTGGCACAGGCCA
----AGCCTCAGGCA-
 A G T C A G C T A C G T A T G C A C G T A C T G A T C G A G T C G T C A A T G C C G T A A C T G A C T G A T G C G T A C G T C A
A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CYTCTGGCACAGGCCA-
--ANTGCCTGAGGCAAN
 A G T C A G C T A C G T A T G C A C G T A C T G A T C G A G T C G T C A A T G C C G T A A C T G A C T G A T G C G T A C G T C A A C G T
A C G T A C G T C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CYTCTGGCACAGGCCA-
-----GCCTCAGGGCAT
 A G T C A G C T A C G T A T G C A C G T A C T G A T C G A G T C G T C A A T G C C G T A A C T G A C T G A T G C G T A C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CYTCTGGCACAGGCCA-
--ATTGCCTGAGGCAAT
 A G T C A G C T A C G T A T G C A C G T A C T G A T C G A G T C G T C A A T G C C G T A A C T G A C T G A T G C G T A C G T C A A C G T
A C G T A C G T G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CYTCTGGCACAGGCCA
--TGGGGCAAAGGTCA
 A G T C A G C T A C G T A T G C A C G T A C T G A T C G A G T C G T C A A T G C C G T A A C T G A C T G A T G C G T A C G T C A
A C G T A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CYTCTGGCACAGGCCA-
-----SCCTSAGGSCAW
 A G T C A G C T A C G T A T G C A C G T A C T G A T C G A G T C G T C A A T G C C G T A A C T G A C T G A T G C G T A C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CYTCTGGCACAGGCCA
--TAGGGCAAAGGTCA
 A G T C A G C T A C G T A T G C A C G T A C T G A T C G A G T C G T C A A T G C C G T A A C T G A C T G A T G C G T A C G T C A
A C G T A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

HES7/MA0822.1/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CYTCTGGCACAGGCCA
----TGGCACGTGCCA
 A G T C A G C T A C G T A T G C A C G T A C T G A T C G A G T C G T C A A T G C C G T A A C T G A C T G A T G C G T A C G T C A
A C G T A C G T A C G T A C G T G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A