Information for 3-SCTTTCARAAGGGTGT (Motif 5)

T A G C A G T C A G C T C G A T A C G T A G T C C G T A C T A G C T G A G C T A C T A G A T C G T A C G C G A T C T A G A C G T
Reverse Opposite:
T G C A A G T C G C T A A T G C T A G C G A T C C G A T G A C T G A T C A C G T T C A G T G C A C G T A C T G A A C T G A T C G
p-value:1e-10
log p-value:-2.532e+01
Information Content per bp:1.632
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif5.16%
Number of Background Sequences with motif120.2
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets54.6 +/- 22.6bp
Average Position of motif in Background48.5 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:SCTTTCARAAGGGTGT
CCTTTTATAGNC----
 T A G C A G T C A G C T C G A T A C G T A G T C C G T A C T A G C T G A G C T A C T A G A T C G T A C G C G A T C T A G A C G T
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:SCTTTCARAAGGGTGT
CCTTTGATGT------
 T A G C A G T C A G C T C G A T A C G T A G T C C G T A C T A G C T G A G C T A C T A G A T C G T A C G C G A T C T A G A C G T
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:3
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--SCTTTCARAAGGGTGT
TNCCTTTGATCTTN----
 A C G T A C G T T A G C A G T C A G C T C G A T A C G T A G T C C G T A C T A G C T G A G C T A C T A G A T C G T A C G C G A T C T A G A C G T
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T A C G T A C G T A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:4
Score:0.53
Offset:2
Orientation:forward strand
Alignment:SCTTTCARAAGGGTGT
--TTTTATKRGG----
 T A G C A G T C A G C T C G A T A C G T A G T C C G T A C T A G C T G A G C T A C T A G A T C G T A C G C G A T C T A G A C G T
A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:SCTTTCARAAGGGTGT
CCTTTGAWGT------
 T A G C A G T C A G C T C G A T A C G T A G T C C G T A C T A G C T G A G C T A C T A G A T C G T A C G C G A T C T A G A C G T
A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--SCTTTCARAAGGGTGT
TNCCTTTGATGT------
 A C G T A C G T T A G C A G T C A G C T C G A T A C G T A G T C C G T A C T A G C T G A G C T A C T A G A T C G T A C G C G A T C T A G A C G T
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:7
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:SCTTTCARAAGGGTGT----
---------TGGGTGTGGCN
 T A G C A G T C A G C T C G A T A C G T A G T C C G T A C T A G C T G A G C T A C T A G A T C G T A C G C G A T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C

HOXC13/MA0907.1/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:SCTTTCARAAGGGTGT
-NTTTTACGAGN----
 T A G C A G T C A G C T C G A T A C G T A G T C C G T A C T A G C T G A G C T A C T A G A T C G T A C G C G A T C T A G A C G T
A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:9
Score:0.51
Offset:8
Orientation:forward strand
Alignment:SCTTTCARAAGGGTGT----
--------NTGGGTGTGGCC
 T A G C A G T C A G C T C G A T A C G T A G T C C G T A C T A G C T G A G C T A C T A G A T C G T A C G C G A T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:10
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----SCTTTCARAAGGGTGT
ATTTCCTTTGATCTATA---
 A C G T A C G T A C G T A C G T T A G C A G T C A G C T C G A T A C G T A G T C C G T A C T A G C T G A G C T A C T A G A T C G T A C G C G A T C T A G A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A A C G T A C G T A C G T